RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 CIAPIN1Q6FI81 312 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 JADE3Q92613 823 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 ERP44Q9BS26 406 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 POLR1BQ9H9Y6 1135 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 TMEM165Q9HC07 324 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 AVENQ9NQS1 362 aaPredicted RBP13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 STK36Q9NRP7 1315 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 USP17L8P0C7I0 530 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 PDK1Q15118 436 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 MTDHQ86UE4 582 aaKnown RBP13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 STX12Q86Y82 276 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 CLYBLQ8N0X4 340 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 SLITRK1Q96PX8 696 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 PPP1R16BQ96T49 567 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 TWF1Q12792 350 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 DOK7Q18PE1 504 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 CENPLQ8N0S6 344 aaPredicted RBP13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 GDPD5Q8WTR4 605 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 AGPAT1Q99943 283 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 S100A6P06703 90 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 TRAF3Q13114 568 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 EFHC1Q5JVL4 640 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 CYP2D7A0A087X1C5 515 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 MAGEB2O15479 319 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 SOAT2O75908 522 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 PGK2P07205 417 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 SOAT1P35610 550 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 ITGA8P53708 1063 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 TRAF2Q12933 501 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 RASA2Q15283 850 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 TTLL6Q8N841 843 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 AGAP3Q96P47 875 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 MMP19Q99542 508 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 FUT8Q9BYC5 575 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 CCSER1Q9C0I3 900 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 COPS7BQ9H9Q2 264 aaPredicted RBP13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 TADA2AO75478 443 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 PTPN4P29074 926 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 PHKA1P46020 1223 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 ZNF284Q2VY69 593 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 RAET1EQ8TD07 263 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 DDX20Q9UHI6 824 aaKnown RBP13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 TRIM49D1C9J1S8 452 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 DDR2Q16832 855 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 ROGDIQ9GZN7 287 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 CD274Q9NZQ7 290 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 DSEQ9UL01 958 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 MYRFQ9Y2G1 1151 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 PRR23AA6NEV1 266 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 A8MXQ7 604 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 CYP19A1P11511 503 aaPredicted RBP13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 SLC34A1Q06495 639 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 ERAP2Q6P179 960 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 DNAJC10Q8IXB1 793 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 PNKPQ96T60 521 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 ILKAPQ9H0C8 392 aaPredicted RBP13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 VPS51Q9UID3 782 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 BTBD3Q9Y2F9 522 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 ATP10AO60312 1499 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 HEATR9A2RTY3 570 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 F8W810 466 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 STX11O75558 287 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 POTEIP0CG38 1075 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 YWHAZP63104 245 aaKnown RBP13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 WDR36Q8NI36 951 aaKnown RBP13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 GORASP1Q9BQQ3 440 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 GJB4Q9NTQ9 266 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 AKAP7Q9P0M2 348 aaPredicted RBP13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 SLAIN2Q9P270 581 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 TAGLN3Q9UI15 199 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 URB1O60287 2271 aaKnown RBP13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 ERVK-10P10266 1014 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 YY1P25490 414 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 C10orf53Q8N6V4 93 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 SLC7A14Q8TBB6 771 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 RBAKQ9NYW8 714 aaPredicted RBP13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 LNPEPQ9UIQ6 1025 aa13.66□□□□□ -0.22
SRGAP3-201ENST00000360413 POTEMA6NI47 508 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 SMIM22K7EJ46 135 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 ETFBP38117 255 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 FEN1P39748 380 aaKnown RBP13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 KCNB2Q92953 911 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 LOC102724428A0A0B4J2F2 783 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 A0A1W2PRG6 482 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 C2orf81A6NN90 581 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 MAGEA10P43363 369 aaPredicted RBP13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 SIK1P57059 783 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 TTC23Q5W5X9 447 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 FAM111AQ96PZ2 611 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 FAM213AQ9BRX8 229 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 ZNF624Q9P2J8 865 aaPredicted RBP13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 SPASTQ9UBP0 616 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 ITIH6Q6UXX5 1313 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 A0A1B0GTH6 734 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 ADD2P35612 726 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 EIF4A1P60842 406 aaKnown RBP13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 CDK20Q8IZL9 346 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 KIAA0556O60303 1618 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 AKAP5P24588 427 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 WASHC2DQ5SRD0 308 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms