RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 TAS2R42Q7RTR8 314 aa9.09□□□□□ -0.96
COL6A6-201ENST00000358511 FAM160B2Q86V87 743 aa9.09□□□□□ -0.96
COL6A6-201ENST00000358511 ASAP3Q8TDY4 903 aa9.09□□□□□ -0.96
COL6A6-201ENST00000358511 FLT1P17948 1338 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 SNTNA6NMZ2 147 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 H0YIN7 160 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 DFFAO00273 331 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 CYTH3O43739 400 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 IGKV5-2P06315 115 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 RALBP11234 206 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 RIPK1Q13546 671 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 ZNF618Q5T7W0 954 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 USP49Q70CQ1 688 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 TDRD5Q8NAT2 981 aaKnown RBP9.08□□□□□ -0.96
COL6A6-201ENST00000358511 NDNQ99608 321 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 FAM118BQ9BPY3 351 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 PACSIN1Q9BY11 444 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 KLHL31Q9H511 634 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 NRDE2Q9H7Z3 1164 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 SP110Q9HB58 689 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 FAM196BA6NMK8 535 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 E9PBE3 544 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 FCHO1O14526 889 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 KLHL41O60662 606 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 P4HBP07237 508 aaKnown RBP9.08□□□□□ -0.96
COL6A6-201ENST00000358511 HSD17B4P51659 736 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 C1DQ13901 141 aaKnown RBP9.08□□□□□ -0.96
COL6A6-201ENST00000358511 TRIM74Q86UV6 250 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 TRIM73Q86UV7 250 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 ARL10Q8N8L6 244 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 TADA1Q96BN2 335 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 PLEKHA8Q96JA3 519 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 SHOC2Q9UQ13 582 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 ARHGEF28Q8N1W1 1705 aaKnown RBP9.08□□□□□ -0.96
COL6A6-201ENST00000358511 PRAMEF22A3QJZ6 481 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 GSG1L2A8MUP6 293 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 ATP9BO43861 1147 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 PON1P27169 355 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 TUBA4AP68366 448 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 COBLL1Q53SF7 1204 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 EPHA10Q5JZY3 1008 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 LAYNQ6UX15 382 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 ASZ1Q8WWH4 475 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 PYDC1Q8WXC3 89 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 DCP1AQ9NPI6 582 aaPredicted RBP9.08□□□□□ -0.96
COL6A6-201ENST00000358511 AK5Q9Y6K8 562 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 HEATR9A2RTY3 570 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 SVOPQ8N4V2 548 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 DIS3LQ8TF46 1054 aaKnown RBP9.08□□□□□ -0.96
COL6A6-201ENST00000358511 APOPT1Q96IL0 206 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 FAM167AQ96KS9 214 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 FAM193BQ96PV7 902 aaPredicted RBP9.08□□□□□ -0.96
COL6A6-201ENST00000358511 MRPL4Q9BYD3 311 aaKnown RBP9.08□□□□□ -0.96
COL6A6-201ENST00000358511 KCNK4Q9NYG8 393 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 UBA6A0AVT1 1052 aaPredicted RBP9.08□□□□□ -0.96
COL6A6-201ENST00000358511 SHOX2O60902 331 aaPredicted RBP9.08□□□□□ -0.96
COL6A6-201ENST00000358511 RAD23AP54725 363 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 PTPAQ15257 358 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 SMTNL2Q2TAL5 461 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 ADGRF4Q8IZF3 695 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 SRBD1Q8N5C6 995 aaKnown RBP9.08□□□□□ -0.96
COL6A6-201ENST00000358511 FBXO36Q8NEA4 188 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 NAT9Q9BTE0 207 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 SEMA4AQ9H3S1 761 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 HSMCR30P0CW71 290 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 SSTR3P32745 418 aaPredicted RBP9.08□□□□□ -0.96
COL6A6-201ENST00000358511 TPI1P60174 286 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 CDK16Q00536 496 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 NIM1KQ8IY84 436 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 S100ZQ8WXG8 99 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 OLFM1Q99784 485 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 TMEM8AQ9HCN3 771 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 CLIC5Q9NZA1 410 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 AGO2Q9UKV8 859 aaKnown RBP9.08□□□□□ -0.96
COL6A6-201ENST00000358511 EVPLLA8MZ36 301 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 TIMM44O43615 452 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 BGNP21810 368 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 TMEM179Q6ZVK1 233 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 DHDDSQ86SQ9 333 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 BBS7Q8IWZ6 715 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.08□□□□□ -0.96
COL6A6-201ENST00000358511 TMEM260Q9NX78 707 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 NEXMIFQ5QGS0 1516 aa9.08□□□□□ -0.96
COL6A6-201ENST00000358511 ZSCAN5CA6NGD5 496 aaPredicted RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 SMNDC1O75940 238 aaKnown RBP eCLIP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 ARIH2O95376 493 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 STIP1P31948 543 aaKnown RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 PDK3Q15120 406 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 PID1Q7Z2X4 250 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 HAUS6Q7Z4H7 955 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 ABHD8Q96I13 439 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 POLR3FQ9H1D9 316 aaPredicted RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 EHD4Q9H223 541 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 SORCS3Q9UPU3 1222 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 ADGRA2Q96PE1 1338 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 PRR23AA6NEV1 266 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 FAM205CA6NFA0 338 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 SUPT3HB4E1H0 165 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 SNPHO15079 494 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 TRAF2Q12933 501 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms