RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 MTFR1Q15390 333 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 PARK7Q99497 189 aaKnown RBP10.12□□□□□ -0.79
CHD3-202ENST00000358181 OMDQ99983 421 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 TNKS2Q9H2K2 1166 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 TUT1Q9H6E5 874 aaKnown RBP10.12□□□□□ -0.79
CHD3-202ENST00000358181 ADGRL3Q9HAR2 1447 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 OR6B1O95007 311 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 C4BPBP20851 252 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 ACTR2P61160 394 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 ARID5BQ14865 1188 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 NCAPHQ15003 741 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 NCF4Q15080 339 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 MIB1Q86YT6 1006 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 KIF2CQ99661 725 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 MSRAQ9UJ68 235 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 TTC37Q6PGP7 1564 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 RASGRP1O95267 797 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 TGM3Q08188 693 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 TMC4Q7Z404 712 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 ANKFN1Q8N957 763 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 MRPS31Q92665 395 aaKnown RBP10.11□□□□□ -0.79
CHD3-202ENST00000358181 SGF29Q96ES7 293 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 TSPAN17Q96FV3 270 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 NEK6Q9HC98 313 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 SNPHO15079 494 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 ASNSP08243 561 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 ADCY2Q08462 1091 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 FAM45BPQ6NSW5 357 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 RABGGTAQ92696 567 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 PAGE5Q96GU1 130 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 MYOCQ99972 504 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 FAM118BQ9BPY3 351 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 SPON1Q9HCB6 807 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 ATP10DQ9P241 1426 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 CCL15-CCL14A0A0B4J2E2 113 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 APRTP07741 180 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 CCL15Q16663 113 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 GOLGA7BQ2TAP0 167 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 CCDC144BQ3MJ40 725 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 C4orf46Q504U0 113 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 PACS2Q86VP3 889 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 DCP1BQ8IZD4 617 aaKnown RBP10.11□□□□□ -0.79
CHD3-202ENST00000358181 ALDH8A1Q9H2A2 487 aaPredicted RBP10.11□□□□□ -0.79
CHD3-202ENST00000358181 FOXP1Q9H334 677 aaPredicted RBP10.11□□□□□ -0.79
CHD3-202ENST00000358181 SAMD9LQ8IVG5 1584 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 PLEKHG1Q9ULL1 1385 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 SNAPC2Q13487 334 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 ARMC7Q9H6L4 198 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 POLR1BQ9H9Y6 1135 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 GJA1P17302 382 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 VAMP7P51809 220 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 ZNF658Q5TYW1 1059 aaPredicted RBP10.11□□□□□ -0.79
CHD3-202ENST00000358181 CDC73Q6P1J9 531 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 SFR1Q86XK3 245 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 MICALL2Q8IY33 904 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 XXYLT1Q8NBI6 393 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 CPA5Q8WXQ8 436 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 SLITRK1Q96PX8 696 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 COQ7Q99807 217 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 CATSPERBQ9H7T0 1116 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 CCDC177Q9NQR7 707 aaPredicted RBP10.11□□□□□ -0.79
CHD3-202ENST00000358181 PIGUQ9H490 435 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 ACAD9Q9H845 621 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 CAB39LQ9H9S4 337 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 SMARCAL1Q9NZC9 954 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 DSEQ9UL01 958 aa10.11□□□□□ -0.79
CHD3-202ENST00000358181 ARHGDIBP52566 201 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 GRIK3Q13003 919 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 CHPFQ8IZ52 775 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 CCDC54Q8NEL0 328 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 UBASH3BQ8TF42 649 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 WBP11Q9Y2W2 641 aaKnown RBP10.1□□□□□ -0.79
CHD3-202ENST00000358181 LYVE1Q9Y5Y7 322 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 ERVK-7P63135 1459 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 TIMM44O43615 452 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 PMPCBO75439 489 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 SLC25A12O75746 678 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 MPOP05164 745 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 MSH3P20585 1137 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 S100GP29377 79 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 EPHB3P54753 998 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 NECAB2Q7Z6G3 386 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 LRRC49Q8IUZ0 686 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 FAM9CQ8IZT9 166 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 NKD1Q969G9 470 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 KCTD10Q9H3F6 313 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 COL15A1P39059 1388 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 ABCC12Q96J65 1359 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 STAG3L1P0CL83 205 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 SLC39A14Q15043 492 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 EFL1Q7Z2Z2 1120 aaKnown RBP10.1□□□□□ -0.79
CHD3-202ENST00000358181 BRINP2Q9C0B6 783 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 RGS12O14924 1447 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 KATNA1O75449 491 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 ATP1A3P13637 1013 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 VAV1P15498 845 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 NR1D1P20393 614 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 ATP5F1P24539 256 aaPredicted RBP10.1□□□□□ -0.79
CHD3-202ENST00000358181 CASP9P55211 416 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 APBA1Q02410 837 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms