RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 PBX3P40426 434 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 ACADSBP45954 432 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 BCAR1P56945 870 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 SLC8A3P57103 927 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 DAB2IPQ5VWQ8 1189 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 OR6B2Q6IFH4 312 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 RSRC2Q7L4I2 434 aaKnown RBP17.96■□□□□ 0.47
TPM1-205ENST00000357980 CTAGE6Q86UF2 777 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 PIGZQ86VD9 579 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 ZDHHC17Q8IUH5 632 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 SCUBE3Q8IX30 993 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 CTAGE4Q8IX94 777 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 RASGEF1CQ8N431 466 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.96■□□□□ 0.47
TPM1-205ENST00000357980 TMLHEQ9NVH6 421 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 TMEM59LQ9UK28 342 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 FGFR3P22607 806 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 CDR1P51861 262 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 CACNA2D1P54289 1103 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 TSPY1Q01534 308 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 PIGHQ14442 188 aaPredicted RBP17.95■□□□□ 0.46
TPM1-205ENST00000357980 NAA30Q147X3 362 aaPredicted RBP17.95■□□□□ 0.46
TPM1-205ENST00000357980 CFAP221Q4G0U5 840 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 FUT10Q6P4F1 479 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 TMCO2Q7Z6W1 182 aaPredicted RBP17.95■□□□□ 0.46
TPM1-205ENST00000357980 ACTRT1Q8TDG2 376 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 BCL7CQ8WUZ0 217 aaPredicted RBP17.95■□□□□ 0.46
TPM1-205ENST00000357980 KCTD13Q8WZ19 329 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 KHSRPQ92945 711 aaKnown RBP eCLIP17.95■□□□□ 0.464e-9■□□□□ 9.5
TPM1-205ENST00000357980 SMARCD1Q96GM5 515 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 SMOQ99835 787 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 NT5C1B-RDH14C9J2C7 533 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 AP1G2O75843 785 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 EFEMP2O95967 443 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 SCNN1AP37088 669 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 SLC6A3Q01959 620 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 ITIH3Q06033 890 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 MRPL58Q14197 206 aaKnown RBP17.95■□□□□ 0.46
TPM1-205ENST00000357980 MAPRE1Q15691 268 aaKnown RBP17.95■□□□□ 0.46
TPM1-205ENST00000357980 VARS2Q5ST30 1063 aaKnown RBP17.95■□□□□ 0.46
TPM1-205ENST00000357980 CCDC181Q5TID7 509 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 FAM171A1Q5VUB5 890 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 TRNP1Q6NT89 227 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 C16orf59Q7L2K0 433 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 EMC1Q8N766 993 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 ZMIZ2Q8NF64 920 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 RPGRIP1Q96KN7 1286 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 CSNK1G1Q9HCP0 422 aa17.95■□□□□ 0.46
TPM1-205ENST00000357980 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.95■□□□□ 0.46
TPM1-205ENST00000357980 TTC7AQ9ULT0 858 aaPredicted RBP17.95■□□□□ 0.46
TPM1-205ENST00000357980 V9GYY5 206 aaPredicted RBP17.95■□□□□ 0.46
TPM1-205ENST00000357980 KIAA1671Q9BY89 1806 aa17.94■□□□□ 0.46
TPM1-205ENST00000357980 C2CD4BA6NLJ0 364 aa17.94■□□□□ 0.46
TPM1-205ENST00000357980 F8VP50 259 aa17.94■□□□□ 0.46
TPM1-205ENST00000357980 CEP104O60308 925 aa17.94■□□□□ 0.46
TPM1-205ENST00000357980 PAFAH1B1P43034 410 aa17.94■□□□□ 0.46
TPM1-205ENST00000357980 MAP3K7CLP57077 242 aa17.94■□□□□ 0.46
TPM1-205ENST00000357980 TAS2R40P59535 323 aa17.94■□□□□ 0.46
TPM1-205ENST00000357980 ELAVL2Q12926 359 aaKnown RBP17.94■□□□□ 0.46
TPM1-205ENST00000357980 RHOBTB2Q9BYZ6 727 aa17.94■□□□□ 0.46
TPM1-205ENST00000357980 ZCWPW1Q9H0M4 648 aa17.94■□□□□ 0.46
TPM1-205ENST00000357980 PSTPIP1O43586 416 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 LCP1P13796 627 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 ALDH7A1P49419 539 aaKnown RBP17.93■□□□□ 0.46
TPM1-205ENST00000357980 TAF5Q15542 800 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 SLC26A9Q7LBE3 791 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 NOA1Q8NC60 698 aaKnown RBP17.93■□□□□ 0.46
TPM1-205ENST00000357980 SPATA4Q8NEY3 305 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 CLEC4CQ8WTT0 213 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 TSC1Q92574 1164 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 GOLGA1Q92805 767 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 RNPC3Q96LT9 517 aaKnown RBP17.93■□□□□ 0.46
TPM1-205ENST00000357980 KCNK16Q96T55 309 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 HHLA1C9JL84 531 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 PGRMC1O00264 195 aaKnown RBP17.93■□□□□ 0.46
TPM1-205ENST00000357980 TCF4P15884 667 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 PSMA2P25787 234 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 FLT3P36888 993 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 ZNF143P52747 638 aaPredicted RBP17.93■□□□□ 0.46
TPM1-205ENST00000357980 ADCY1Q08828 1119 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 ADIGQ0VDE8 80 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 PPIGQ13427 754 aaKnown RBP eCLIP17.93■□□□□ 0.461e-7■■□□□ 14.5
TPM1-205ENST00000357980 ERCC6LQ2NKX8 1250 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 RAB41Q5JT25 222 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 ARCQ7LC44 396 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 OTOP2Q7RTS6 562 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 ARFGAP1Q8N6T3 406 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 B3GALT6Q96L58 329 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.93■□□□□ 0.468e-7■■■□□ 15.2
TPM1-205ENST00000357980 UBXN6Q9BZV1 441 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 USTQ9Y2C2 406 aa17.93■□□□□ 0.46
TPM1-205ENST00000357980 LAMA2P24043 3122 aaKnown RBP17.93■□□□□ 0.46
TPM1-205ENST00000357980 GRAP2O75791 330 aa17.92■□□□□ 0.46
TPM1-205ENST00000357980 OR4Q2P0C623 313 aa17.92■□□□□ 0.46
TPM1-205ENST00000357980 PYGMP11217 842 aa17.92■□□□□ 0.46
TPM1-205ENST00000357980 BDNFP23560 247 aa17.92■□□□□ 0.46
TPM1-205ENST00000357980 RWDD2BP57060 319 aa17.92■□□□□ 0.46
TPM1-205ENST00000357980 ZNF211Q13398 564 aaPredicted RBP17.92■□□□□ 0.46
TPM1-205ENST00000357980 FAM117BQ6P1L5 589 aa17.92■□□□□ 0.46
TPM1-205ENST00000357980 CC2D1AQ6P1N0 951 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms