RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 GAB4Q2WGN9 574 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 ARSIQ5FYB1 569 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 SH3PXD2AQ5TCZ1 1133 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 UNQ6494/PRO21346Q6UXR6 183 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 DPH6Q7L8W6 267 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 OSTM1Q86WC4 334 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 BRSK2Q8IWQ3 736 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 ADGRG2Q8IZP9 1017 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 TOP6BLQ8N6T0 577 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 ARL14EPQ8N8R7 260 aaPredicted RBP9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 KRI1Q8N9T8 703 aaKnown RBP9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 FSIP1Q8NA03 581 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 ZSWIM2Q8NEG5 633 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 CACTINQ8WUQ7 758 aaKnown RBP9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 MARVELD3Q96A59 401 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 SPATA17Q96L03 361 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 CNOT6LQ96LI5 555 aaKnown RBP9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 ZMYND15Q9H091 742 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 TMEM9BQ9NQ34 198 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 SEL1LQ9UBV2 794 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 RALYQ9UKM9 306 aaKnown RBP9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 ZMIZ1Q9ULJ6 1067 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 CELSR3Q9NYQ7 3312 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 NBEAQ8NFP9 2946 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 C2orf78A6NCI8 922 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 H3BQV1 296 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 NFATC1O95644 943 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 ITGB3P05106 788 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 CKMP06732 381 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 NUDT7P0C024 238 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 GARTP22102 1010 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 ACAT1P24752 427 aaKnown RBP9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 GJB2P29033 226 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 PCSK1P29120 753 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 GBP1P32455 592 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 PDE6CP51160 858 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 IRX4P78413 519 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 MRPS21P82921 87 aaKnown RBP9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 RBP5P82980 135 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 TFAMQ00059 246 aaKnown RBP9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 PSMD2Q13200 908 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 CRY1Q16526 586 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 SOWAHAQ2M3V2 549 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 SPDYCQ5MJ68 293 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 L1TD1Q5T7N2 865 aaKnown RBP9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 VSTM1Q6UX27 236 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 CSGALNACT2Q8N6G5 542 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 TSTD1Q8NFU3 115 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 DNAJC19Q96DA6 116 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 TMX3Q96JJ7 454 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 FAM213AQ9BRX8 229 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 TRPC7Q9HCX4 862 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 EVLQ9UI08 416 aaPredicted RBP9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 SIX4Q9UIU6 781 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 ITGA11Q9UKX5 1188 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 MMP17Q9ULZ9 603 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 INVSQ9Y283 1065 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 SNX9Q9Y5X1 595 aa9.19□□□□□ -0.94
COL4A3BP-202ENST00000357457 ANKRD11Q6UB99 2663 aaPredicted RBP9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 TMEM8BA6NDV4 472 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 ANTXRLA6NF34 631 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 MYMKA6NI61 221 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 PATE3B3GLJ2 98 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 HCRTO43612 131 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 OLFM2O95897 454 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 TOP3BO95985 862 aaKnown RBP9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 HNRNPLP14866 589 aaKnown RBP eCLIP9.18□□□□□ -0.946e-7■■□□□ 13.3
COL4A3BP-202ENST00000357457 BCKDHBP21953 392 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 LMO2P25791 158 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 PPP3CCP48454 512 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 SLC7A9P82251 487 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 ZNF252P-AS1Q0IIN9 211 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 CCDC142Q17RM4 750 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 HSF5Q4G112 596 aaPredicted RBP9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 C2orf27AQ580R0 203 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 ERICH6BQ5W0A0 696 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 C4orf50Q6ZRC1 276 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 USP49Q70CQ1 688 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 DYMQ7RTS9 669 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 SFR1Q86XK3 245 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 SPATA2LQ8IUW3 424 aaPredicted RBP9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 ADGRF2Q8IZF7 708 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 GATA6Q92908 595 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 EPSTI1Q96J88 318 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 ACCSQ96QU6 501 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 FNBP1Q96RU3 617 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 TTLL2Q9BWV7 592 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 RNF38Q9H0F5 515 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 MRPL44Q9H9J2 332 aaKnown RBP9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 MAGEC2Q9UBF1 373 aaPredicted RBP9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 CDH9Q9ULB4 789 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 EXOC7Q9UPT5 735 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 LOC400499M0QZD8 3231 aa9.18□□□□□ -0.94
COL4A3BP-202ENST00000357457 KNL1Q8NG31 2342 aa9.17□□□□□ -0.94
COL4A3BP-202ENST00000357457 ADAMTS9Q9P2N4 1935 aa9.17□□□□□ -0.94
COL4A3BP-202ENST00000357457 FRMD3A2A2Y4 597 aa9.17□□□□□ -0.94
COL4A3BP-202ENST00000357457 ZNF840PA6NDX5 716 aa9.17□□□□□ -0.94
COL4A3BP-202ENST00000357457 UPK3BL1B0FP48 263 aa9.17□□□□□ -0.94
COL4A3BP-202ENST00000357457 UPK3BL2E5RIL1 263 aa9.17□□□□□ -0.94
COL4A3BP-202ENST00000357457 LEFTY2O00292 366 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms