RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 KIF20BQ96Q89 1820 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 LSM8O95777 96 aaKnown RBP16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 KCNA4P22459 653 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 ATICP31939 592 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 LAMB3Q13751 1172 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 GOLGA7BQ2TAP0 167 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 KBTBD12Q3ZCT8 623 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 TAS2R42Q7RTR8 314 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 ADCK1Q86TW2 530 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 EMC1Q8N766 993 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 CNPY3Q9BT09 278 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 MTMR12Q9C0I1 747 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 MAGEB2O15479 319 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 ITGB3P05106 788 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 NUDT17P0C025 328 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 CYP2C8P10632 490 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 CDH2P19022 906 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 CNTFP26441 200 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 RPL10AP62906 217 aaKnown RBP16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 PTK6Q13882 451 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 SLC30A10Q6XR72 485 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 SHCBP1Q8NEM2 672 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 IPMKQ8NFU5 416 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 ETNPPLQ8TBG4 499 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 VCPIP1Q96JH7 1222 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 MMP19Q99542 508 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 AVENQ9NQS1 362 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 NDFIP2Q9NV92 336 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 TBC1D4O60343 1298 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 PDE5AO76074 875 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 MYL3P08590 195 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 ADRA1DP25100 572 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 KCNJ2P63252 427 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 CBWD6Q4V339 395 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 CBWD3Q5JTY5 395 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 CBWD5Q5RIA9 395 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 DENND1BQ6P3S1 775 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 MFSD7Q6UXD7 560 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 PARD3BQ8TEW8 1205 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 TSR3Q9UJK0 312 aaKnown RBP16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 SLITRK3O94933 977 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 UNC5CO95185 931 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 CPA3P15088 417 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 IFNA8P32881 189 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 GCNT1Q02742 428 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 IL17AQ16552 155 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 FAM83EQ2M2I3 478 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 NOP9Q86U38 636 aaKnown RBP16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 C4orf19Q8IY42 314 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 DEFB107AQ8IZN7 70 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 APBB2Q92870 758 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 OXNAD1Q96HP4 312 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 TRIM54Q9BYV2 358 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 USP18Q9UMW8 372 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 ASB14A6NK59 587 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 BTNL10A8MVZ5 291 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 TIMM44O43615 452 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 ALBP02768 609 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 MAPTP10636 758 aaKnown RBP16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 MRPS15P82914 257 aaKnown RBP16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 ANO4Q32M45 955 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 SLC45A4Q5BKX6 768 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 SEL1L3Q68CR1 1132 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 ZNF606Q8WXB4 792 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 CGRRF1Q99675 332 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 GANQ9H2C0 597 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 CISHQ9NSE2 258 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 CTNNAL1Q9UBT7 734 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 PCYOX1Q9UHG3 505 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 PIN4Q9Y237 131 aaKnown RBP16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 AP4S1Q9Y587 144 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 SNX13Q9Y5W8 968 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 SMIM22K7EJ46 135 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 RARBP10826 455 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 RARRES1P49788 294 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 APOBEC3FQ8IUX4 373 aaKnown RBP16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 SLC25A41Q8N5S1 370 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 ZNF280CQ8ND82 737 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 DNAJC19Q96DA6 116 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 ATG4CQ96DT6 458 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 CHCHD3Q9NX63 227 aaKnown RBP16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 CNTNAP4Q9C0A0 1308 aa16.17■□□□□ 0.18
TRAPPC11-202ENST00000357207 E9PBE3 544 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 FAM86B1E9PN63 330 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 KLHL41O60662 606 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 FAM86B2P0C5J1 330 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 TFE3P19532 575 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 DUPD1Q68J44 220 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 AADACL2Q6P093 401 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 PRELID2Q8N945 189 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 SLC7A14Q8TBB6 771 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 AFG1LQ8WV93 481 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 SH3GL2Q99962 352 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 CYP39A1Q9NYL5 469 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 ARMCX1Q9P291 453 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 DNPEPQ9ULA0 475 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 C19orf81C9J6K1 198 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 OPLAHO14841 1288 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 ZNF263O14978 683 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 464.5 ms