RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 KLF6Q99612 283 aaPredicted RBP17.86■□□□□ 0.45
COL27A1-201ENST00000356083 PRKAB1Q9Y478 270 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 ARF4P18085 180 aaPredicted RBP17.86■□□□□ 0.45
COL27A1-201ENST00000356083 ZCCHC8Q6NZY4 707 aaKnown RBP17.86■□□□□ 0.45
COL27A1-201ENST00000356083 FAM45AQ8TCE6 357 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 CMTM5Q96DZ9 223 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 GOLPH3Q9H4A6 298 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 SPON1Q9HCB6 807 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 CD209Q9NNX6 404 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 POLE3Q9NRF9 147 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 RRN3P2A6NIE6 340 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 DCDC2CA8MYV0 355 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 TSPAN3O60637 253 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 SOAT2O75908 522 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 EFNA5P52803 228 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 NRG3P56975 720 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 TRAF2Q12933 501 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 BIKQ13323 160 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 SGSM1Q2NKQ1 1148 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 TTC33Q6PID6 262 aaPredicted RBP17.86■□□□□ 0.45
COL27A1-201ENST00000356083 PRRG4Q9BZD6 226 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 DCDC2Q9UHG0 476 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 NEU2Q9Y3R4 380 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 CCDC189A1A4V9 331 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 GOLGA8TH3BQL2 631 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 MCAMP43121 646 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 ARID5BQ14865 1188 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 ANGEL2Q5VTE6 544 aaKnown RBP17.85■□□□□ 0.45
COL27A1-201ENST00000356083 TDP2O95551 362 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 SARSP49591 514 aaKnown RBP17.85■□□□□ 0.45
COL27A1-201ENST00000356083 NECAB2Q7Z6G3 386 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 PARP9Q8IXQ6 854 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 RNPC3Q96LT9 517 aaKnown RBP17.85■□□□□ 0.45
COL27A1-201ENST00000356083 COQ7Q99807 217 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 DDIT4Q9NX09 232 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 MINPP1Q9UNW1 487 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 SH3GLB1Q9Y371 365 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 UBTFL6P0CB48 400 aaPredicted RBP17.85■□□□□ 0.45
COL27A1-201ENST00000356083 ODC1P11926 461 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 TGM2P21980 687 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 CYP2C19P33261 490 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 ACOX1Q15067 660 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 TTC39BQ5VTQ0 682 aaPredicted RBP17.85■□□□□ 0.45
COL27A1-201ENST00000356083 NEK7Q8TDX7 302 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 PIGHQ14442 188 aaPredicted RBP17.85■□□□□ 0.45
COL27A1-201ENST00000356083 CHI3L2Q15782 390 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 POM121L1PQ3SYA9 428 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 ENOSF1Q7L5Y1 443 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 ATP6V0D2Q8N8Y2 350 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 USP7Q93009 1102 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 ZNF669Q96BR6 464 aaPredicted RBP17.85■□□□□ 0.45
COL27A1-201ENST00000356083 M0QYT0 321 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 OR6B1O95007 311 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 NDUFAF6Q330K2 333 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 FAXCQ5TGI0 409 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 ARL6IP4Q66PJ3 421 aaKnown RBP17.85■□□□□ 0.45
COL27A1-201ENST00000356083 ESRP1Q6NXG1 681 aaKnown RBP17.85■□□□□ 0.45
COL27A1-201ENST00000356083 NOTUMQ6P988 496 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 RIN2Q8WYP3 895 aaPredicted RBP17.85■□□□□ 0.45
COL27A1-201ENST00000356083 AGPAT1Q99943 283 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 ZNF23P17027 643 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 QRICH1Q2TAL8 776 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 CACTIN-AS1Q8N1I8 211 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 COLEC11Q9BWP8 271 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 CNGB3Q9NQW8 809 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 SEPT3Q9UH03 358 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 RBBP8Q99708 897 aa17.85■□□□□ 0.45
COL27A1-201ENST00000356083 ZNF624Q9P2J8 865 aaPredicted RBP17.85■□□□□ 0.45
COL27A1-201ENST00000356083 ATF7IP2Q5U623 682 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 SLC35G2Q8TBE7 412 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 CLPBQ9H078 707 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 CYLDQ9NQC7 956 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 SMARCAL1Q9NZC9 954 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 DYTNA2CJ06 578 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 ITGB3P05106 788 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 PDZK1Q5T2W1 519 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 ZNF333Q96JL9 665 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 SPRP35270 261 aaPredicted RBP17.84■□□□□ 0.45
COL27A1-201ENST00000356083 SCRN3Q0VDG4 424 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 TRIP10Q15642 601 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 MAP4K1Q92918 833 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.84■□□□□ 0.453e-6■□□□□ 8.8
COL27A1-201ENST00000356083 VPS28Q9UK41 221 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 PCDHB12Q9Y5F1 795 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 GPATCH8Q9UKJ3 1502 aaKnown RBP17.84■□□□□ 0.45
COL27A1-201ENST00000356083 SNUPNO95149 360 aaKnown RBP17.84■□□□□ 0.45
COL27A1-201ENST00000356083 SRLQ86TD4 932 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 OPLAHO14841 1288 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 URODP06132 367 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 IFNAR1P17181 557 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 PODNQ7Z5L7 613 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 DCP1BQ8IZD4 617 aaKnown RBP17.84■□□□□ 0.45
COL27A1-201ENST00000356083 SKA1Q96BD8 255 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 PALLDQ8WX93 1383 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 STXBP3O00186 592 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 PRR29P0C7W0 189 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 TGM3Q08188 693 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 ULK3Q6PHR2 472 aa17.84■□□□□ 0.45
COL27A1-201ENST00000356083 UNKQ9C0B0 810 aaKnown RBP17.84■□□□□ 0.45
COL27A1-201ENST00000356083 ARMC7Q9H6L4 198 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms