RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 SYTL5Q8TDW5 730 aaPredicted RBP12.84□□□□□ -0.35
COLCA1-201ENST00000355430 CENPTQ96BT3 561 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 HES6Q96HZ4 224 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 SKAP2O75563 359 aaPredicted RBP12.84□□□□□ -0.35
COLCA1-201ENST00000355430 VHLP40337 213 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 RGS7P49802 495 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 BTG3Q14201 252 aaPredicted RBP12.84□□□□□ -0.35
COLCA1-201ENST00000355430 SGSM1Q2NKQ1 1148 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 TMC7Q7Z402 723 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 FBXO36Q8NEA4 188 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 TINF2Q9BSI4 451 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 TARS2Q9BW92 718 aaKnown RBP12.84□□□□□ -0.35
COLCA1-201ENST00000355430 MRPL9Q9BYD2 267 aaKnown RBP12.84□□□□□ -0.35
COLCA1-201ENST00000355430 NMRK2Q9NPI5 230 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 FRMPD4Q14CM0 1322 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 SRRM3A6NNA2 597 aaPredicted RBP12.84□□□□□ -0.35
COLCA1-201ENST00000355430 C2CD2LO14523 706 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 GRAP2O75791 330 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 MOCS2O96007 188 aaPredicted RBP12.84□□□□□ -0.35
COLCA1-201ENST00000355430 IGFBP4P22692 258 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 SOX10P56693 466 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 RHBDL3P58872 404 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 CYP24A1Q07973 514 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 CCNG2Q16589 344 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 EFHC2Q5JST6 749 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 TTC39BQ5VTQ0 682 aaPredicted RBP12.84□□□□□ -0.35
COLCA1-201ENST00000355430 ACAD11Q709F0 780 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 PRPF39Q86UA1 669 aaKnown RBP12.84□□□□□ -0.35
COLCA1-201ENST00000355430 MTDHQ86UE4 582 aaKnown RBP12.84□□□□□ -0.35
COLCA1-201ENST00000355430 EFHBQ8N7U6 833 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 ICA1LQ8NDH6 482 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 KAT5Q92993 513 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 PPP1R36Q96LQ0 422 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 PDCD2LQ9BRP1 358 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 TMEM121Q9BTD3 319 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 CHST7Q9NS84 486 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 PDGFRAP16234 1089 aa12.83□□□□□ -0.35
COLCA1-201ENST00000355430 SESN2P58004 480 aaPredicted RBP12.83□□□□□ -0.35
COLCA1-201ENST00000355430 SFSWAPQ12872 951 aaKnown RBP12.83□□□□□ -0.35
COLCA1-201ENST00000355430 TMED1Q13445 227 aa12.83□□□□□ -0.35
COLCA1-201ENST00000355430 IKBKEQ14164 716 aa12.83□□□□□ -0.35
COLCA1-201ENST00000355430 SLITRK1Q96PX8 696 aa12.83□□□□□ -0.35
COLCA1-201ENST00000355430 TMEM237Q96Q45 408 aa12.83□□□□□ -0.35
COLCA1-201ENST00000355430 GGA2Q9UJY4 613 aa12.83□□□□□ -0.35
COLCA1-201ENST00000355430 ZC3H4Q9UPT8 1303 aaKnown RBP12.83□□□□□ -0.35
COLCA1-201ENST00000355430 ADAMTSL3P82987 1691 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 RBP3P10745 1247 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 CHI3L2Q15782 390 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 CNGA2Q16280 664 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 DNAL1Q4LDG9 190 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 MCOLN2Q8IZK6 566 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 TRIML2Q8N7C3 387 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 EFHD1Q9BUP0 239 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 WDR18Q9BV38 432 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 ACP6Q9NPH0 428 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 FZD1Q9UP38 647 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 GAKO14976 1311 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 NFIBO00712 420 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 TAF6P49848 677 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 MRPS35P82673 323 aaKnown RBP12.83□□□□□ -0.36
COLCA1-201ENST00000355430 CCDC15Q0P6D6 951 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 SLC30A9Q6PML9 568 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 ZFPM1Q8IX07 1006 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 CLMNQ96JQ2 1002 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 TMEM150BA6NC51 233 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 HMGCRP04035 888 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 PSEN2P49810 448 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 MYBPC2Q14324 1141 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 KCNT1Q5JUK3 1230 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 DUPD1Q68J44 220 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 PDZD8Q8NEN9 1154 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.83□□□□□ -0.36
COLCA1-201ENST00000355430 E2F8A0AVK6 867 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 ZC3H11AO75152 810 aaKnown RBP eCLIP12.83□□□□□ -0.36
COLCA1-201ENST00000355430 DYNC1I2Q13409 638 aaKnown RBP12.83□□□□□ -0.36
COLCA1-201ENST00000355430 AUHQ13825 339 aaKnown RBP12.83□□□□□ -0.36
COLCA1-201ENST00000355430 SV2AQ7L0J3 742 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 NEUROG2Q9H2A3 272 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 PCDHB8Q9UN66 801 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 ANGPTL3Q9Y5C1 460 aa12.83□□□□□ -0.36
COLCA1-201ENST00000355430 TRIM49D1C9J1S8 452 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 PIK3CDO00329 1044 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 EGFRP00533 1210 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 CALCAP01258 141 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 SNRPAP09012 282 aaKnown RBP12.82□□□□□ -0.36
COLCA1-201ENST00000355430 APLP1P51693 650 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 KPNA2P52292 529 aaKnown RBP12.82□□□□□ -0.36
COLCA1-201ENST00000355430 PREPLQ4J6C6 727 aaPredicted RBP12.82□□□□□ -0.36
COLCA1-201ENST00000355430 SPOCD1Q6ZMY3 1216 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 GPR142Q7Z601 462 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 E2F7Q96AV8 911 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 OLFM3Q96PB7 478 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 GTSE1Q9NYZ3 720 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 WDR35Q9P2L0 1181 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 TRIM33Q9UPN9 1127 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 C15orf41Q9Y2V0 281 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 RGPD2P0DJD1 1756 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 ZNF286BP0CG31 522 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 CASP2P42575 452 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 ARSHQ5FYA8 562 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms