RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 PPP1R18Q6NYC8 613 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 AMIGO2Q86SJ2 522 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 KBTBD6Q86V97 674 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 SLFN12Q8IYM2 578 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 COX4I2Q96KJ9 171 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 KREMEN1Q96MU8 473 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 BIRC8Q96P09 236 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 PPP1R10Q96QC0 940 aaKnown RBP8.2□□□□□ -1.1
CD46-203ENST00000354848 TSPAN18Q96SJ8 248 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 EBF4Q9BQW3 602 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 OSBPL6Q9BZF3 934 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 TMEM117Q9H0C3 514 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 FUOMA2VDF0 154 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 P4HA2O15460 535 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 ADCY6O43306 1168 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 SLITRK3O94933 977 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 FAM58BPP0C7Q3 252 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 EEF2P13639 858 aaKnown RBP8.2□□□□□ -1.1
CD46-203ENST00000354848 CYP11B1P15538 503 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 CD58P19256 250 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 CDK9P50750 372 aaKnown RBP8.2□□□□□ -1.1
CD46-203ENST00000354848 SLC18A2Q05940 514 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 PTP4A2Q12974 167 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 SLC15A2Q16348 729 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 HIF1AQ16665 826 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 MSS51Q4VC12 460 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 RINT1Q6NUQ1 792 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 SH2D5Q6ZV89 423 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 DZIP1Q86YF9 867 aaKnown RBP8.2□□□□□ -1.1
CD46-203ENST00000354848 HPS6Q86YV9 775 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 RTKN2Q8IZC4 609 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 OGFOD1Q8N543 542 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 DDX17Q92841 729 aaKnown RBP8.2□□□□□ -1.1
CD46-203ENST00000354848 TEKT1Q969V4 418 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 SRPK1Q96SB4 655 aaKnown RBP8.2□□□□□ -1.1
CD46-203ENST00000354848 SHOC2Q9UQ13 582 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 CLEC11AQ9Y240 323 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 ATF5Q9Y2D1 282 aaPredicted RBP8.2□□□□□ -1.1
CD46-203ENST00000354848 RABGAP1Q9Y3P9 1069 aa8.2□□□□□ -1.1
CD46-203ENST00000354848 FAM32AQ9Y421 112 aaKnown RBP8.2□□□□□ -1.1
CD46-203ENST00000354848 PNMA6FA0A0J9YX94 578 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 SDR42E2A6NKP2 422 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 USP17L15C9J2P7 530 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 USP17L13C9JLJ4 530 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 USP17L11C9JVI0 530 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 USP17L18D6R9N7 530 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 USP17L22D6RA61 530 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 USP17L17D6RBQ6 530 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 USP17L19D6RCP7 530 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 USP17L20D6RJB6 530 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 PROCP04070 461 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 PHKA2P46019 1235 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 GCLMP48507 274 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 TAS2R40P59535 323 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 TMPRSS15P98073 1019 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 USP17L24Q0WX57 530 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 CETN1Q12798 172 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 PDAP1Q13442 181 aaKnown RBP8.19□□□□□ -1.1
CD46-203ENST00000354848 SYCP2LQ5T4T6 812 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 RC3H1Q5TC82 1133 aaKnown RBP8.19□□□□□ -1.1
CD46-203ENST00000354848 LLGL2Q6P1M3 1020 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 USP17L6PQ6QN14 398 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 CDHR3Q6ZTQ4 885 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 TMEM110Q86TL2 294 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 PQLC1Q8N2U9 271 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 EFCAB3Q8N7B9 438 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 ACTRT2Q8TDY3 377 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 ARHGEF1Q92888 912 aaKnown RBP8.19□□□□□ -1.1
CD46-203ENST00000354848 TMIGD2Q96BF3 282 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 WDR83Q9BRX9 315 aaKnown RBP8.19□□□□□ -1.1
CD46-203ENST00000354848 NYXQ9GZU5 481 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 PSTPIP2Q9H939 334 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 JMJD4Q9H9V9 463 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 CYP4F11Q9HBI6 524 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 GPCPD1Q9NPB8 672 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 COQ6Q9Y2Z9 468 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 COL24A1Q17RW2 1714 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 DOT1LQ8TEK3 1739 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 A0A1B0GTW7 788 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 GRIN3BO60391 1043 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 TRPA1O75762 1119 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 GJC1P36383 396 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 PTK7Q13308 1070 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 ITGA7Q13683 1181 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 FNBP1LQ5T0N5 605 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 ZNF720Q7Z2F6 126 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 NANOGNBQ7Z5D8 188 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 MAPKAPK5Q8IW41 473 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 LZTR1Q8N653 840 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 SNX27Q96L92 541 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 NLRP4Q96MN2 994 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 CSRNP1Q96S65 589 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 FIZ1Q96SL8 496 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 C20orf27Q9GZN8 174 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 ZNF287Q9HBT7 754 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 TFCP2L1Q9NZI6 479 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 PADI4Q9UM07 663 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 PSMD13Q9UNM6 376 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 ITGB4P16144 1822 aa8.19□□□□□ -1.1
CD46-203ENST00000354848 CYP3A7-CYP3A51PA0A087WV96 503 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms