RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 FRA10AC1Q70Z53 315 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 BTN2A1Q7KYR7 527 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 TMEM87BQ96K49 555 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 LRGUKQ96M69 825 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 VPS4AQ9UN37 437 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 CFL2Q9Y281 166 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 TOGARAM1Q9Y4F4 1720 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 TRIM49BA6NDI0 452 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 FOXO6A8MYZ6 492 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 CCDC188H7C350 402 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 COL6A1P12109 1028 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 HNF1BP35680 557 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 NFIXQ14938 502 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 INSCQ1MX18 579 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 SFT2D3Q587I9 215 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 SLC27A3Q5K4L6 730 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 CDKAL1Q5VV42 579 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 TRIM56Q9BRZ2 755 aaKnown RBP12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 WDR70Q9NW82 654 aa12.73□□□□□ -0.37
CTNNB1-201ENST00000349496 CAPN8A6NHC0 703 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 ATP6V1G2-DDX39BF2Z307 99 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 ITGAXP20702 1163 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 CA4P22748 312 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 PTPN9P43378 593 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 AKR1D1P51857 326 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 OCA2Q04671 838 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 CEP55Q53EZ4 464 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 OTOP3Q7RTS5 596 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 RUNDC3BQ96NL0 473 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 EMSYQ7Z589 1322 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 ZNF839A8K0R7 811 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 PHF2O75151 1096 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 UFL1O94874 794 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 PEX2P28328 305 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 BTDP43251 543 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 YARSP54577 528 aaKnown RBP12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 TRMT5Q32P41 509 aaKnown RBP12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 PRR16Q569H4 304 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 ATG14Q6ZNE5 492 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 CYP2U1Q7Z449 544 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 AKAP14Q86UN6 197 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 CATSPER1Q8NEC5 780 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 ABI2Q9NYB9 513 aaPredicted RBP12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 APOBEC2Q9Y235 224 aaKnown RBP12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 KIF1AQ12756 1690 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 COL1A1P02452 1464 aaPredicted RBP12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 ITM2AO43736 263 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 IFNAR1P17181 557 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 GNA12Q03113 381 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 TRPC3Q13507 836 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 FAM122CQ6P4D5 195 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 CORO6Q6QEF8 472 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 DHDDSQ86SQ9 333 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 CDH24Q86UP0 819 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 FBXO25Q8TCJ0 367 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 ACTRT1Q8TDG2 376 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 KBTBD7Q8WVZ9 684 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 GJA10Q969M2 543 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 DHRS9Q9BPW9 319 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 DDX43Q9NXZ2 648 aaKnown RBP12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 SNTG2Q9NY99 539 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 PPM1HQ9ULR3 514 aa12.72□□□□□ -0.37
CTNNB1-201ENST00000349496 PDS5AQ29RF7 1337 aaKnown RBP12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 MTA2O94776 668 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 NELFEP18615 380 aaKnown RBP12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 SOX5P35711 763 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 TRAF2Q12933 501 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 NONOQ15233 471 aaKnown RBP eCLIP12.71□□□□□ -0.371e-8■■■□□ 17.3
CTNNB1-201ENST00000349496 HP1BP3Q5SSJ5 553 aaPredicted RBP12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 ZNF410Q86VK4 478 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 REM2Q8IYK8 340 aaPredicted RBP12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 ZNF507Q8TCN5 953 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 CLPTM1LQ96KA5 538 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 ZSCAN10Q96SZ4 725 aaPredicted RBP12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 KCNN3Q9UGI6 736 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 B8ZZF3 427 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 EXTL3O43909 919 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 PAHP00439 452 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 FGGP02679 453 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 ITGA4P13612 1032 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 CDH2P19022 906 aaPredicted RBP12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 CFL1P23528 166 aaKnown RBP12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 CRABP2P29373 138 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 PRKCEQ02156 737 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 PTGDRQ13258 359 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 MTMR2Q13614 643 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 LAMC2Q13753 1193 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 TOMM20Q15388 145 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 NFE2Q16621 373 aaPredicted RBP12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 DALRD3Q5D0E6 543 aaKnown RBP12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 SLC10A5Q5PT55 438 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 MAPKAPK5Q8IW41 473 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 TERB1Q8NA31 727 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 ST13P5Q8NFI4 369 aaPredicted RBP12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 RILPQ96NA2 401 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 OLFM1Q99784 485 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 EPB41L1Q9H4G0 881 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 RAD21L1Q9H4I0 556 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 DCAF16Q9NXF7 216 aa12.71□□□□□ -0.37
CTNNB1-201ENST00000349496 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms