RNA–Protein interactions for RNA: ENST00000348386.7

CAST-205, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-205ENST00000348386 EFR3BQ9Y2G0 817 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 SCN1AP35498 2009 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 TNRC18O15417 2968 aaPredicted RBP8.18□□□□□ -1.1
CAST-205ENST00000348386 ARHGEF37A1IGU5 675 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 MYBPHLA2RUH7 354 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 CLDN5O00501 218 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 GABRDO14764 452 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 NRDCO43847 1150 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 CYP11A1P05108 521 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 PTPN1P18031 435 aaKnown RBP8.18□□□□□ -1.1
CAST-205ENST00000348386 HNRNPH3P31942 346 aaKnown RBP8.18□□□□□ -1.1
CAST-205ENST00000348386 PPM1AP35813 382 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 SCTRP47872 440 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 BPIFB4P59827 614 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 CYP27A1Q02318 531 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 GFPT1Q06210 699 aaPredicted RBP8.18□□□□□ -1.1
CAST-205ENST00000348386 MEA1Q16626 185 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 USP41Q3LFD5 358 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 TTC39BQ5VTQ0 682 aaPredicted RBP8.18□□□□□ -1.1
CAST-205ENST00000348386 RAD9BQ6WBX8 426 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 LIMS2Q7Z4I7 341 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 TMTC1Q8IUR5 882 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 TMEM139Q8IV31 216 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 OR10T2Q8NGX3 314 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 UBA3Q8TBC4 463 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 ZNF606Q8WXB4 792 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 TNIP3Q96KP6 325 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 AGPAT1Q99943 283 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 RTP3Q9BQQ7 232 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 MED10Q9BTT4 135 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 MSRAQ9UJ68 235 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 NOCTQ9UK39 431 aaKnown RBP8.18□□□□□ -1.1
CAST-205ENST00000348386 CNTN6Q9UQ52 1028 aa8.18□□□□□ -1.1
CAST-205ENST00000348386 RALGAPA2Q2PPJ7 1873 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 COL4A6Q14031 1691 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 SYN3O14994 580 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 SOD2P04179 222 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 TYMPP19971 482 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 FGFR3P22607 806 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 PCSK1P29120 753 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 ZNF132P52740 706 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 CCZ1BP86790 482 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 CCZ1P86791 482 aaPredicted RBP8.17□□□□□ -1.1
CAST-205ENST00000348386 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.17□□□□□ -1.1
CAST-205ENST00000348386 SLC39A12Q504Y0 691 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 SGO2Q562F6 1265 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 PPP1R26Q5T8A7 1209 aaPredicted RBP8.17□□□□□ -1.1
CAST-205ENST00000348386 RSPO2Q6UXX9 243 aaPredicted RBP8.17□□□□□ -1.1
CAST-205ENST00000348386 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.17□□□□□ -1.1
CAST-205ENST00000348386 LRRTM3Q86VH5 581 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 UNC93AQ86WB7 457 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 PALB2Q86YC2 1186 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 TTC39CQ8N584 583 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 B3GALNT2Q8NCR0 500 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 SLC2A14Q8TDB8 520 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 ARNTL2Q8WYA1 636 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 CYFIP2Q96F07 1278 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 PGLYRP2Q96PD5 576 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 PCDHB18PQ96TA0 734 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 DESI2Q9BSY9 194 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 RHOBTB2Q9BYZ6 727 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 SLC28A3Q9HAS3 691 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 CRTAC1Q9NQ79 661 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 TMLHEQ9NVH6 421 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 PCDHA11Q9Y5I1 949 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.17□□□□□ -1.1
CAST-205ENST00000348386 A0A087X0T9 212 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 DDX3XO00571 662 aaKnown RBP eCLIP8.17□□□□□ -1.15e-8■■□□□ 14.4
CAST-205ENST00000348386 ADAM12O43184 909 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 ATMINO43313 823 aaPredicted RBP8.17□□□□□ -1.1
CAST-205ENST00000348386 OAZ2O95190 189 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 URODP06132 367 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 PAEPP09466 180 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 FAM228BP0C875 321 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 VDRP11473 427 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 CPB1P15086 417 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 CHRNB2P17787 502 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 PRKCIP41743 596 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 GLUD2P49448 558 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 KIF11P52732 1056 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 TSPY1Q01534 308 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 FMO1Q01740 532 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 CDR2Q01850 454 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 TAP1Q03518 808 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 PSMD5Q16401 504 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 GOLGA7BQ2TAP0 167 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 ALG1LQ6GMV1 187 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 ZNF280DQ6N043 979 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 DENND1BQ6P3S1 775 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 TOGARAM2Q6ZUX3 1019 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 DDX53Q86TM3 631 aaKnown RBP8.17□□□□□ -1.1
CAST-205ENST00000348386 VPS36Q86VN1 386 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 SLC30A5Q8TAD4 765 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 LNX1Q8TBB1 728 aaPredicted RBP8.17□□□□□ -1.1
CAST-205ENST00000348386 CPA5Q8WXQ8 436 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 DDX1Q92499 740 aaKnown RBP8.17□□□□□ -1.1
CAST-205ENST00000348386 TGS1Q96RS0 853 aaKnown RBP8.17□□□□□ -1.1
CAST-205ENST00000348386 ACBD6Q9BR61 282 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 CDH9Q9ULB4 789 aa8.17□□□□□ -1.1
CAST-205ENST00000348386 PCDHGC5Q9Y5F6 944 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms