RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 MEIS3P2A8K0S8 358 aa14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SHOX2O60902 331 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 TRUB2O95900 331 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CHRNA1P02708 482 aa14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 MYCNP04198 464 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CD48P09326 243 aa14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 NR1D1P20393 614 aa14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 KLRC2P26717 231 aa14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 PCK1P35558 622 aa14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 TAF5Q15542 800 aa14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 C15orf59Q2T9L4 293 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 KRT71Q3SY84 523 aa14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SV2CQ496J9 727 aa14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 UBAP2Q5T6F2 1119 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 PRUNE1Q86TP1 453 aa14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SERINC5Q86VE9 423 aa14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SCUBE3Q8IX30 993 aa14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CMASQ8NFW8 434 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SNX25Q9H3E2 840 aa14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 AAASQ9NRG9 546 aa14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ANAPC5Q9UJX4 755 aa14.82□□□□□ -0.04
CDK5RAP1-202ENST00000346416 HUS1O60921 280 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ADAMTS4O75173 837 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 GABBR2O75899 941 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ALDH1A1P00352 501 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CCDC130P13994 396 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ACTN2P35609 894 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ATP1A2P50993 1020 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 DYNLT1P63172 113 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SKOR1P84550 965 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CAP1Q01518 475 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CAV1Q03135 178 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 TAZQ16635 292 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 LIMS2Q7Z4I7 341 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 KCTD6Q8NC69 237 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 STK32AQ8WU08 396 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 HHIPL1Q96JK4 782 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 PPP1R10Q96QC0 940 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CAPS2Q9BXY5 557 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SENP6Q9GZR1 1112 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 XPNPEP3Q9NQH7 507 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 BCCIPQ9P287 314 aaKnown RBP eCLIP14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 DRG1Q9Y295 367 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 TMEM88BA6NKF7 163 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 PAPSS1O43252 624 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 RIPK2O43353 540 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CST8O60676 142 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ASGR1P07306 291 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ADORA2BP29275 332 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 LRPAP1P30533 357 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CHKAP35790 457 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 VCPP55072 806 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 NKX3-2P78367 333 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SLC6A3Q01959 620 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 PLCB3Q01970 1234 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 OASLQ15646 514 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CDO1Q16878 200 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 RAB6CQ53S08 254 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 KDM7AQ6ZMT4 941 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ADGRF2Q8IZF7 708 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ALLCQ8N6M5 410 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ANKRD52Q8NB46 1076 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 GLIS1Q8NBF1 620 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 HSPH1Q92598 858 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 NKD2Q969F2 451 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CFAP57Q96MR6 1250 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 PEBP4Q96S96 227 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 B3GNT5Q9BYG0 378 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 RAB6CQ9H0N0 254 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 FAM105AQ9NUU6 356 aa14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SAE1Q9UBE0 346 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CCND3P30281 292 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SNX16P57768 344 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 BST2Q10589 180 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CCDC14Q49A88 953 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 EMC10Q5UCC4 262 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 IZUMO3Q5VZ72 239 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 LEKR1Q6ZMV7 388 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 BBS12Q6ZW61 710 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 BBOF1Q8ND07 529 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 KHSRPQ92945 711 aaKnown RBP eCLIP14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 TSPYL1Q9H0U9 437 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CALCOCO1Q9P1Z2 691 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 DCAF8L1A6NGE4 600 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ZSCAN5DPP0CG00 497 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 HPDP32754 393 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 MLH1P40692 756 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 IRAK1P51617 712 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 BCAT1P54687 386 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ATP11AP98196 1134 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 KCNA10Q16322 511 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SKIDA1Q1XH10 827 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 P3H1Q32P28 736 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 AGBL2Q5U5Z8 902 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 TTC19Q6DKK2 380 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CYP4V2Q6ZWL3 525 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 TRMT10CQ7L0Y3 403 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 TOP6BLQ8N6T0 577 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 GSTCDQ8NEC7 633 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 UHMK1Q8TAS1 419 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms