RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 F8VP50 259 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 SPECC1L-ADORA2AF8WAN1 911 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 RTN3O95197 1032 aaPredicted RBP21.31■■□□□ 1
CEACAM3-201ENST00000344550 HLA-DRAP01903 254 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 CCNE1P24864 410 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 PIK3CAP42336 1068 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 LRRC63Q05C16 580 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 PNOCQ13519 176 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 MAML2Q8IZL2 1156 aaPredicted RBP21.31■■□□□ 1
CEACAM3-201ENST00000344550 PDZD8Q8NEN9 1154 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 SMARCE1Q969G3 411 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 SLITRK1Q96PX8 696 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 TSG101Q99816 390 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 B3GNT5Q9BYG0 378 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 SMYD3Q9H7B4 428 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 PRMT8Q9NR22 394 aaPredicted RBP21.31■■□□□ 1
CEACAM3-201ENST00000344550 GKN1Q9NS71 199 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 ARHGAP26Q9UNA1 814 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 PCDHGA2Q9Y5H1 932 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 PTPRDP23468 1912 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 TICRRQ7Z2Z1 1910 aa21.31■■□□□ 1
CEACAM3-201ENST00000344550 CKMP06732 381 aa21.3■■□□□ 1
CEACAM3-201ENST00000344550 EPB41P11171 864 aaKnown RBP21.3■■□□□ 1
CEACAM3-201ENST00000344550 CHRNB1P11230 501 aa21.3■■□□□ 1
CEACAM3-201ENST00000344550 HDCP19113 662 aa21.3■■□□□ 1
CEACAM3-201ENST00000344550 CDH8P55286 799 aa21.3■■□□□ 1
CEACAM3-201ENST00000344550 FKBP3Q00688 224 aaKnown RBP21.3■■□□□ 1
CEACAM3-201ENST00000344550 INCA1Q0VD86 236 aa21.3■■□□□ 1
CEACAM3-201ENST00000344550 KRT39Q6A163 491 aa21.3■■□□□ 1
CEACAM3-201ENST00000344550 FOXR2Q6PJQ5 311 aa21.3■■□□□ 1
CEACAM3-201ENST00000344550 NUP93Q8N1F7 819 aa21.3■■□□□ 1
CEACAM3-201ENST00000344550 NELL1Q92832 810 aa21.3■■□□□ 1
CEACAM3-201ENST00000344550 SMARCD1Q96GM5 515 aa21.3■■□□□ 1
CEACAM3-201ENST00000344550 DPEP3Q9H4B8 488 aa21.3■■□□□ 1
CEACAM3-201ENST00000344550 LMAN1LQ9HAT1 526 aa21.3■■□□□ 1
CEACAM3-201ENST00000344550 NDRG2Q9UN36 371 aaKnown RBP21.3■■□□□ 1
CEACAM3-201ENST00000344550 PCDHA5Q9Y5H7 936 aa21.3■■□□□ 1
CEACAM3-201ENST00000344550 OBSL1O75147 1896 aa21.29■■□□□ 1
CEACAM3-201ENST00000344550 ZNF840PA6NDX5 716 aa21.29■■□□□ 1
CEACAM3-201ENST00000344550 SLC16A3O15427 465 aaKnown RBP21.29■■□□□ 1
CEACAM3-201ENST00000344550 CLSTN1O94985 981 aa21.29■■□□□ 1
CEACAM3-201ENST00000344550 PRCPP42785 496 aa21.29■■□□□ 1
CEACAM3-201ENST00000344550 ASPAP45381 313 aa21.29■■□□□ 1
CEACAM3-201ENST00000344550 CCR3P51677 355 aa21.29■■□□□ 1
CEACAM3-201ENST00000344550 NRLP54845 237 aa21.29■■□□□ 1
CEACAM3-201ENST00000344550 STIM1Q13586 685 aa21.29■■□□□ 1
CEACAM3-201ENST00000344550 RUNX3Q13761 415 aa21.29■■□□□ 1
CEACAM3-201ENST00000344550 ZC3H3Q8IXZ2 948 aaKnown RBP21.29■■□□□ 1
CEACAM3-201ENST00000344550 ZNF518BQ9C0D4 1074 aa21.29■■□□□ 1
CEACAM3-201ENST00000344550 DMAP1Q9NPF5 467 aaPredicted RBP21.29■■□□□ 1
CEACAM3-201ENST00000344550 GTSE1Q9NYZ3 720 aa21.29■■□□□ 1
CEACAM3-201ENST00000344550 IL37Q9NZH6 218 aa21.29■■□□□ 1
CEACAM3-201ENST00000344550 CCL26Q9Y258 94 aa21.29■■□□□ 1
CEACAM3-201ENST00000344550 PTPRZ1P23471 2315 aaPredicted RBP21.29■■□□□ 1
CEACAM3-201ENST00000344550 GREB1Q4ZG55 1949 aa21.29■■□□□ 1
CEACAM3-201ENST00000344550 KIF26AQ9ULI4 1882 aaPredicted RBP21.28■■□□□ 1
CEACAM3-201ENST00000344550 FAM186AA6NE01 2351 aa21.28■■□□□ 1
CEACAM3-201ENST00000344550 KINO60870 393 aaKnown RBP21.28■■□□□ 1
CEACAM3-201ENST00000344550 GCLMP48507 274 aa21.28■■□□□ 1
CEACAM3-201ENST00000344550 SLC7A9P82251 487 aa21.28■■□□□ 1
CEACAM3-201ENST00000344550 PPP3CAQ08209 521 aa21.28■■□□□ 1
CEACAM3-201ENST00000344550 USP4Q13107 963 aa21.28■■□□□ 1
CEACAM3-201ENST00000344550 MTAPQ13126 283 aa21.28■■□□□ 1
CEACAM3-201ENST00000344550 MTF1Q14872 753 aa21.28■■□□□ 1
CEACAM3-201ENST00000344550 ZNF77Q15935 545 aa21.28■■□□□ 1
CEACAM3-201ENST00000344550 SNX30Q5VWJ9 437 aa21.28■■□□□ 1
CEACAM3-201ENST00000344550 SPEM1Q8N4L4 309 aa21.28■■□□□ 1
CEACAM3-201ENST00000344550 OSCP1Q8WVF1 389 aa21.28■■□□□ 1
CEACAM3-201ENST00000344550 ZFYVE19Q96K21 471 aa21.28■■□□□ 1
CEACAM3-201ENST00000344550 NIF3L1Q9GZT8 377 aa21.28■■□□□ 1
CEACAM3-201ENST00000344550 SMG9Q9H0W8 520 aaKnown RBP21.28■■□□□ 1
CEACAM3-201ENST00000344550 SDCBP2Q9H190 292 aa21.28■■□□□ 1
CEACAM3-201ENST00000344550 CSNK1G1Q9HCP0 422 aa21.28■■□□□ 1
CEACAM3-201ENST00000344550 USP34Q70CQ2 3546 aa21.28■■□□□ 1
CEACAM3-201ENST00000344550 FAM92AA1XBS5 289 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 PSMA7O14818 248 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 PAPSS2O95340 614 aaPredicted RBP21.27■■□□□ 1
CEACAM3-201ENST00000344550 OLFM2O95897 454 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 LMNAP02545 664 aaKnown RBP21.27■■□□□ 1
CEACAM3-201ENST00000344550 YWHAQP27348 245 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 NDST1P52848 882 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 ASCL5Q7RTU5 278 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 FAM35AQ86V20 835 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 GPIHBP1Q8IV16 184 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 FUKQ8N0W3 1084 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 ADSSL1Q8N142 457 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 ZBTB44Q8NCP5 570 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 STKLD1Q8NE28 680 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 TAS1R2Q8TE23 839 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 ATP2A3Q93084 1043 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 DHTKD1Q96HY7 919 aaPredicted RBP21.27■■□□□ 1
CEACAM3-201ENST00000344550 NT5C1AQ9BXI3 368 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 TRPC7Q9HCX4 862 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 ZSCAN32Q9NX65 697 aa21.27■■□□□ 1
CEACAM3-201ENST00000344550 PATJQ8NI35 1801 aa21.27■□□□□ 0.99
CEACAM3-201ENST00000344550 TRDMT1O14717 391 aaKnown RBP21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 TRIM49P0CI25 452 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 TRIM49CP0CI26 452 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 TUBP50607 506 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 USP46P62068 366 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms