RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 NPHS2Q9NP85 383 aa16.25■□□□□ 0.19
CARMIL3-201ENST00000342740 ARHGEF38Q9NXL2 777 aa16.25■□□□□ 0.19
CARMIL3-201ENST00000342740 MARCOQ9UEW3 520 aaPredicted RBP16.25■□□□□ 0.19
CARMIL3-201ENST00000342740 LMO7Q8WWI1 1683 aa16.25■□□□□ 0.19
CARMIL3-201ENST00000342740 SETSIPP0DME0 302 aa16.25■□□□□ 0.19
CARMIL3-201ENST00000342740 GFAPP14136 432 aa16.25■□□□□ 0.19
CARMIL3-201ENST00000342740 SATB1Q01826 763 aa16.25■□□□□ 0.19
CARMIL3-201ENST00000342740 ZNF268Q14587 947 aaPredicted RBP16.25■□□□□ 0.19
CARMIL3-201ENST00000342740 COBLL1Q53SF7 1204 aa16.25■□□□□ 0.19
CARMIL3-201ENST00000342740 MDH1BQ5I0G3 518 aa16.25■□□□□ 0.19
CARMIL3-201ENST00000342740 MUC3BQ9H195 1237 aa16.25■□□□□ 0.19
CARMIL3-201ENST00000342740 AVENQ9NQS1 362 aaPredicted RBP16.25■□□□□ 0.19
CARMIL3-201ENST00000342740 NOP53Q9NZM5 478 aaKnown RBP16.25■□□□□ 0.19
CARMIL3-201ENST00000342740 MOSPD1Q9UJG1 213 aa16.25■□□□□ 0.19
CARMIL3-201ENST00000342740 PCDHGC5Q9Y5F6 944 aa16.25■□□□□ 0.19
CARMIL3-201ENST00000342740 XRN1Q8IZH2 1706 aaKnown RBP16.25■□□□□ 0.19
CARMIL3-201ENST00000342740 TDRD10Q5VZ19 366 aaKnown RBP16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 LVRNQ6Q4G3 990 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 ARHGAP18Q8N392 663 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 EFHBQ8N7U6 833 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 EPS8L3Q8TE67 593 aaKnown RBP16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 GANQ9H2C0 597 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 PSD3Q9NYI0 1048 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 ASTN2O75129 1339 aaPredicted RBP16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 TRIM49D1C9J1S8 452 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 PMPCBO75439 489 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 PSEN2P49810 448 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 KRT33BQ14525 404 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 UGCGQ16739 394 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 RPRD1AQ96P16 312 aaPredicted RBP16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 INPP4AQ96PE3 977 aaPredicted RBP16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 PPP1R2P1Q96PQ5 205 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 CDC42EP4Q9H3Q1 356 aaKnown RBP16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 CYP4F11Q9HBI6 524 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 DDX43Q9NXZ2 648 aaKnown RBP16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 PCDHA3Q9Y5H8 950 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 IRF1P10914 325 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 ACAT1P24752 427 aaKnown RBP16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 TKTL1P51854 596 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 FAM161BQ96MY7 647 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 STARD7Q9NQZ5 370 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 ALDH1A1P00352 501 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 POMCP01189 267 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 GHRP10912 638 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 FDFT1P37268 417 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 ETFBP38117 255 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 BMT2Q1RMZ1 405 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 SEC16BQ96JE7 1060 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 MTIF3Q9H2K0 278 aaKnown RBP16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 KCND1Q9NSA2 647 aa16.24■□□□□ 0.19
CARMIL3-201ENST00000342740 FBXO21O94952 628 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 FSCN1Q16658 493 aaKnown RBP16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 NT5DC4Q86YG4 428 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 FBXO36Q8NEA4 188 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 DDX27Q96GQ7 796 aaKnown RBP16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 SYT15Q9BQS2 421 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 TASP1Q9H6P5 420 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 RAB21Q9UL25 225 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 RIPK3Q9Y572 518 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 RPS6KL1Q9Y6S9 549 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 CFAP73A6NFT4 308 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 MAFO75444 373 aaPredicted RBP16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 FAM107AO95990 144 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 LMNAP02545 664 aaKnown RBP16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 PAEPP09466 180 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 EIF4BP23588 611 aaKnown RBP16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 NFIL3Q16649 462 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 SOCS4Q8WXH5 440 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 TAS2R14Q9NYV8 317 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 GRID1Q9ULK0 1009 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 NALCNQ8IZF0 1738 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 CHUKO15111 745 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 KRT4P19013 534 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 CAPSQ13938 189 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 IMPG1Q17R60 797 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 TTC39BQ5VTQ0 682 aaPredicted RBP16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 FOXR2Q6PJQ5 311 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 DENND5BQ6ZUT9 1274 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 HAUS8Q9BT25 410 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 TRIM54Q9BYV2 358 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 DSEQ9UL01 958 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 E2F8A0AVK6 867 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 FRMD3A2A2Y4 597 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 NDUFS3O75489 264 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 RARAP10276 462 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 BEX3Q00994 111 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 TWF1Q12792 350 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 PTGISQ16647 500 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 ATP6V0D2Q8N8Y2 350 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 SEMA4AQ9H3S1 761 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 FAM8A1Q9UBU6 413 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 AFF4Q9UHB7 1163 aaKnown RBP16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 SLC30A1Q9Y6M5 507 aa16.23■□□□□ 0.19
CARMIL3-201ENST00000342740 CES2O00748 559 aa16.22■□□□□ 0.19
CARMIL3-201ENST00000342740 ZNF263O14978 683 aa16.22■□□□□ 0.19
CARMIL3-201ENST00000342740 TLR2O60603 784 aa16.22■□□□□ 0.19
CARMIL3-201ENST00000342740 ANXA9O76027 345 aa16.22■□□□□ 0.19
CARMIL3-201ENST00000342740 LYPLA2O95372 231 aa16.22■□□□□ 0.19
CARMIL3-201ENST00000342740 BFSP2Q13515 415 aa16.22■□□□□ 0.19
CARMIL3-201ENST00000342740 CTXN3Q4LDR2 81 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms