RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 DNAJC1Q96KC8 554 aaKnown RBP13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 BAG5Q9UL15 447 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 SHOC2Q9UQ13 582 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 F8VP50 259 aa13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 JAK3P52333 1124 aa13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 USP46P62068 366 aa13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 ITGA9Q13797 1035 aa13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 LIN52Q52LA3 116 aa13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 CADM1Q9BY67 442 aaKnown RBP13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 CYLDQ9NQC7 956 aa13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 KCNH7Q9NS40 1196 aa13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 DIP2BQ9P265 1576 aa13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 TGFB1I1O43294 461 aa13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 FAM58BPP0C7Q3 252 aa13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 ALDH1B1P30837 517 aa13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 WDR4P57081 412 aaKnown RBP13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 DCTN2Q13561 401 aaKnown RBP13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 C16orf89Q6UX73 402 aa13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 PCDHB18PQ96TA0 734 aa13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 PAK5Q9P286 719 aa13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 TBX20Q9UMR3 447 aa13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 GJA3Q9Y6H8 435 aa13.02□□□□□ -0.32
SSX2IP-201ENST00000342203 NCANO14594 1321 aa13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 E2F6O75461 281 aa13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 WFS1O76024 890 aa13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 SLITRK3O94933 977 aa13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 C6orf222P0C671 652 aaPredicted RBP13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 TRIM16LQ309B1 348 aa13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 PDPK2PQ6A1A2 396 aa13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 PLEKHA7Q6IQ23 1121 aa13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 CLVS1Q8IUQ0 354 aaPredicted RBP13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 SNX5Q9Y5X3 404 aa13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 NPTXRO95502 500 aa13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 NLRP11P59045 1033 aaKnown RBP13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 KRT76Q01546 638 aa13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 DUOXA2Q1HG44 320 aa13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 ZNF568Q3ZCX4 644 aa13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 CDC42EP5Q6NZY7 148 aa13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 ULK2Q8IYT8 1036 aa13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 LRRC15Q8TF66 581 aa13.02□□□□□ -0.33
SSX2IP-201ENST00000342203 MGEA5O60502 916 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 TBX10O75333 385 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 RGS2P41220 211 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 EML3Q32P44 896 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 TSHZ1Q6ZSZ6 1077 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 GPR141Q7Z602 305 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 UBA3Q8TBC4 463 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 DDI1Q8WTU0 396 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 APOPT1Q96IL0 206 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 PCDH9Q9HC56 1237 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 DDX28Q9NUL7 540 aaKnown RBP13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 PCDHA10Q9Y5I2 948 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 RPS6KA4O75676 772 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 GLRBP48167 497 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 ZBTB41Q5SVQ8 909 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 B3GNT6Q6ZMB0 384 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 UNKQ9C0B0 810 aaKnown RBP13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 PALMDQ9NP74 551 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 CDY2AQ9Y6F7 541 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 CDY1Q9Y6F8 540 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 COMMD3-BMI1R4GMX3 469 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 PRR5-ARHGAP8B1AHC4 643 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 H0YIN7 160 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 SPAG6O75602 509 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 SERPINB9P50453 376 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 ARHGAP8P85298 464 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 CUL2Q13617 745 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 Q4G0T1 1027 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 LRRC8BQ6P9F7 803 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 FAM160B2Q86V87 743 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 RBM15BQ8NDT2 890 aaKnown RBP13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 SEMA6AQ9H2E6 1030 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 ATXN10Q9UBB4 475 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 IL10P22301 178 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 PTGIRP43119 386 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 RAB27AP51159 221 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 NCKAP1LP55160 1127 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 MTHFD1LQ6UB35 978 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 BNC2Q6ZN30 1099 aaPredicted RBP13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 CDKL3Q8IVW4 592 aaPredicted RBP13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 ATP6V1E2Q96A05 226 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 EPAS1Q99814 870 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 TMEM79Q9BSE2 394 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 LRRC4CQ9HCJ2 640 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 ACTL7BQ9Y614 415 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 FSCN2O14926 492 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 ZFXP17010 805 aaPredicted RBP13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 FGFR3P22607 806 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 MAPK6Q16659 721 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 TRIM74Q86UV6 250 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 TRIM73Q86UV7 250 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 CNDP1Q96KN2 507 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 CDRT15Q96T59 188 aa13.01□□□□□ -0.33
SSX2IP-201ENST00000342203 GSTA4O15217 222 aa13□□□□□ -0.33
SSX2IP-201ENST00000342203 SREBF1P36956 1147 aa13□□□□□ -0.33
SSX2IP-201ENST00000342203 FMO1Q01740 532 aa13□□□□□ -0.33
SSX2IP-201ENST00000342203 LBRQ14739 615 aaKnown RBP13□□□□□ -0.33
SSX2IP-201ENST00000342203 FAM182AQ5T1J6 154 aa13□□□□□ -0.33
SSX2IP-201ENST00000342203 TEDDM1Q5T9Z0 273 aa13□□□□□ -0.33
SSX2IP-201ENST00000342203 PBXIP1Q96AQ6 731 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms