RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 DSEQ9UL01 958 aa3.76□□□□□ -1.81
CCDC66-202ENST00000341455 PCDHB7Q9Y5E2 793 aa3.76□□□□□ -1.81
CCDC66-202ENST00000341455 COL5A1P20908 1838 aaPredicted RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 C2orf16Q68DN1 1984 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 SMIM28A0A1B0GU29 152 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 A0A1W2PQC6 194 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 LRRIQ4A6NIV6 560 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 A6NJY4 79 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 LRRIQ3A6PVS8 624 aaPredicted RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 GRXCR1A8MXD5 290 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 ERVH48-1M5A8F1 160 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 CLDN3O15551 220 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 RECQL4O94761 1208 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 KIF4AO95239 1232 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 GBP2P32456 591 aaPredicted RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 PSMC2P35998 433 aaKnown RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 DPP6P42658 865 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 PTGIRP43119 386 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 EPHA5P54756 1037 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 SP4Q02446 784 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 BFSP1Q12934 665 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 GPM6BQ13491 265 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 STIM1Q13586 685 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 COL9A2Q14055 689 aaPredicted RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 TCEA2Q15560 299 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 SNRNP35Q16560 246 aaKnown RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 C11orf91Q3C1V1 193 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 ZNF568Q3ZCX4 644 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 ZC2HC1CQ53FD0 456 aaPredicted RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 MIIPQ5JXC2 388 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 SLC8B1Q6J4K2 584 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 CCDC81Q6ZN84 652 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 LYSMD3Q7Z3D4 306 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 USP37Q86T82 979 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 DDX42Q86XP3 938 aaKnown RBP eCLIP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 FAM114A1Q8IWE2 563 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 EFCAB13Q8IY85 973 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 METTL13Q8N6R0 699 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 GLIS3Q8NEA6 775 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 NLRP4Q96MN2 994 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 CCDC43Q96MW1 224 aaKnown RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 TMEM74Q96NL1 305 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 ACAP3Q96P50 834 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 ERGIC2Q96RQ1 377 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 ARPC5LQ9BPX5 153 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 TARS2Q9BW92 718 aaKnown RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 NXF3Q9H4D5 531 aaKnown RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 NRDE2Q9H7Z3 1164 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 MTRRQ9UBK8 725 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 SIX4Q9UIU6 781 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 FOXD3Q9UJU5 478 aaPredicted RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 PIN4Q9Y237 131 aaKnown RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 NYNRINQ9P2P1 1898 aaKnown RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 A0A1W2PQJ5 194 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 FAM92AA1XBS5 289 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 ZNF233A6NK53 670 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 ANHXE9PGG2 379 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 B4GALT3O60512 393 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 ABLIM3O94929 683 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 GCNT3O95395 438 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 VNN1O95497 513 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 ASMTLO95671 621 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 ASS1P00966 412 aaKnown RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 SOD2P04179 222 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 GALTP07902 379 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 CTSAP10619 480 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 GLULP15104 373 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 BDNFP23560 247 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 ANXA13P27216 316 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 MAGEA11P43364 429 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 LIG4P49917 911 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 ATXN1P54253 815 aaKnown RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 PMS1P54277 932 aaKnown RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 GCNT1Q02742 428 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 CEBPZQ03701 1054 aaKnown RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 SPAG1Q07617 926 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 SH3PXD2AQ5TCZ1 1133 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 C9orf57Q5W0N0 161 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 ANKRD40Q6AI12 368 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 LILRA6Q6PI73 481 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 GLB1LQ6UWU2 654 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 ENOSF1Q7L5Y1 443 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 C14orf80Q86SX3 495 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 THNSL2Q86YJ6 484 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 DRC7Q8IY82 874 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 GRAMD1CQ8IYS0 662 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 GOLGA6L1Q8N7Z2 621 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 CACTINQ8WUQ7 758 aaKnown RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 SLC35C1Q96A29 364 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 IFT43Q96FT9 208 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 IGSF21Q96ID5 467 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 ZMAT2Q96NC0 199 aaKnown RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 TSG101Q99816 390 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 MSTO1Q9BUK6 570 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 NT5C1AQ9BXI3 368 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 SRRTQ9BXP5 876 aaKnown RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 FAM49AQ9H0Q0 323 aaPredicted RBP3.75□□□□□ -1.81
CCDC66-202ENST00000341455 PNPLA8Q9NP80 782 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 UBP1Q9NZI7 540 aa3.75□□□□□ -1.81
CCDC66-202ENST00000341455 MUTYHQ9UIF7 546 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 386.5 ms