RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 KPNA6O60684 536 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 IFI35P80217 286 aaPredicted RBP15.85■□□□□ 0.13
BRAT1-201ENST00000340611 DUOXA2Q1HG44 320 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 TWF2Q6IBS0 349 aaKnown RBP15.85■□□□□ 0.13
BRAT1-201ENST00000340611 SDCCAG8Q86SQ7 713 aaPredicted RBP15.85■□□□□ 0.13
BRAT1-201ENST00000340611 CCNJLQ8IV13 435 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 PCSK9Q8NBP7 692 aaKnown RBP15.85■□□□□ 0.13
BRAT1-201ENST00000340611 ACAP3Q96P50 834 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 DDX23Q9BUQ8 820 aaKnown RBP15.85■□□□□ 0.13
BRAT1-201ENST00000340611 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.85■□□□□ 0.132e-11■■■■■ 64.9
BRAT1-201ENST00000340611 ZWILCHQ9H900 591 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 GOLGA2P5Q9HBQ8 144 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 SIX4Q9UIU6 781 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.85■□□□□ 0.13
BRAT1-201ENST00000340611 BHMG1C9JSJ3 638 aaPredicted RBP15.85■□□□□ 0.13
BRAT1-201ENST00000340611 CRYBB1P53674 252 aaPredicted RBP15.85■□□□□ 0.13
BRAT1-201ENST00000340611 DYNC1I2Q13409 638 aaKnown RBP15.85■□□□□ 0.13
BRAT1-201ENST00000340611 NOP9Q86U38 636 aaKnown RBP15.85■□□□□ 0.13
BRAT1-201ENST00000340611 SESTD1Q86VW0 696 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 WDR49Q8IV35 697 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 ARRDC4Q8NCT1 418 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 FBF1Q8TES7 1133 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 LPPQ93052 612 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 TLCD1Q96CP7 247 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 GLT1D1Q96MS3 346 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 OSGEPQ9NPF4 335 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 PARP2Q9UGN5 583 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 ST3GAL5Q9UNP4 418 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 BZW2Q9Y6E2 419 aaKnown RBP15.85■□□□□ 0.13
BRAT1-201ENST00000340611 B4GALT4O60513 344 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 GSTA1P08263 222 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 CFHP08603 1231 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 IGFBP6P24592 240 aaPredicted RBP15.84■□□□□ 0.13
BRAT1-201ENST00000340611 CD52P31358 61 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 GTF2H1P32780 548 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 SLCO1A2P46721 670 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 SERPINB4P48594 390 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 ATN1P54259 1190 aaPredicted RBP15.84■□□□□ 0.13
BRAT1-201ENST00000340611 PLTPP55058 493 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 CDH8P55286 799 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 BPIFB4P59827 614 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 ZNF211Q13398 564 aaPredicted RBP15.84■□□□□ 0.13
BRAT1-201ENST00000340611 C2CD6Q53TS8 623 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 WDR44Q5JSH3 913 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 NOTUMQ6P988 496 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 SLC27A1Q6PCB7 646 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 ZNF317Q96PQ6 595 aaPredicted RBP15.84■□□□□ 0.13
BRAT1-201ENST00000340611 RNF208Q9H0X6 261 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 SLITRK6Q9H5Y7 841 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 RECQL4O94761 1208 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 H2AFZP0C0S5 128 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 ETS2P15036 469 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 ABCB4P21439 1286 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 UBXN11Q5T124 520 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 TAF2Q6P1X5 1199 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 H2AFVQ71UI9 128 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 RNF169Q8NCN4 708 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 KIF12Q96FN5 646 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 ZFP42Q96MM3 310 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 TUBGCP4Q9UGJ1 667 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 PHF24Q9UPV7 400 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 SNX24Q9Y343 169 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 MROH7Q68CQ1 1323 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 HSPA6P17066 643 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 GSTT1P30711 240 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 MFAP3P55082 362 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 TRPC3Q13507 836 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 PHLDB2Q86SQ0 1253 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 NT5DC3Q86UY8 548 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 PRMT1Q99873 361 aaKnown RBP15.84■□□□□ 0.13
BRAT1-201ENST00000340611 CNOT10Q9H9A5 744 aaKnown RBP15.84■□□□□ 0.13
BRAT1-201ENST00000340611 STARD7Q9NQZ5 370 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 FAM114A2Q9NRY5 505 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 SAGE1Q9NXZ1 904 aa15.84■□□□□ 0.13
BRAT1-201ENST00000340611 BTNL10A8MVZ5 291 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 M0QZ92 97 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 FAM200BP0CF97 657 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 CST5P28325 142 aaPredicted RBP15.83■□□□□ 0.12
BRAT1-201ENST00000340611 POLR2BP30876 1174 aaKnown RBP15.83■□□□□ 0.12
BRAT1-201ENST00000340611 MCCD1P59942 119 aaPredicted RBP15.83■□□□□ 0.12
BRAT1-201ENST00000340611 USP46P62068 366 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 ZNF618Q5T7W0 954 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 RASIP1Q5U651 963 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 TMEM270Q6UE05 265 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 SHC3Q92529 594 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 EPB41L4BQ9H329 900 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 ERVK-5Q9HDB9 667 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 PTPN22Q9Y2R2 807 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 FRMPD3Q5JV73 1810 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 DESP17661 470 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 CCDC38Q502W7 563 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 MIPOL1Q8TD10 442 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 SNRNP27Q8WVK2 155 aaKnown RBP15.83■□□□□ 0.12
BRAT1-201ENST00000340611 RNF25Q96BH1 459 aaPredicted RBP15.83■□□□□ 0.12
BRAT1-201ENST00000340611 ANKRD36BP1Q96IX9 119 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 PCDHB18PQ96TA0 734 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 SENP6Q9GZR1 1112 aaPredicted RBP15.83■□□□□ 0.12
BRAT1-201ENST00000340611 IQCGQ9H095 443 aaKnown RBP15.83■□□□□ 0.12
BRAT1-201ENST00000340611 ADAM7Q9H2U9 754 aa15.83■□□□□ 0.12
BRAT1-201ENST00000340611 STXBP5LQ9Y2K9 1186 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms