RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 BEST1O76090 585 aa18.89■□□□□ 0.61
SDCBP2-201ENST00000339987 LCA5LO95447 670 aa18.89■□□□□ 0.61
SDCBP2-201ENST00000339987 GRIK1P39086 918 aa18.89■□□□□ 0.61
SDCBP2-201ENST00000339987 RPL34P49207 117 aaKnown RBP18.89■□□□□ 0.61
SDCBP2-201ENST00000339987 MAP3K7CLP57077 242 aa18.89■□□□□ 0.61
SDCBP2-201ENST00000339987 PDCLQ13371 301 aa18.89■□□□□ 0.61
SDCBP2-201ENST00000339987 MGAT5BQ3V5L5 792 aa18.89■□□□□ 0.61
SDCBP2-201ENST00000339987 CCDC149Q6ZUS6 474 aa18.89■□□□□ 0.61
SDCBP2-201ENST00000339987 KREMEN2Q8NCW0 462 aa18.89■□□□□ 0.61
SDCBP2-201ENST00000339987 KCTD13Q8WZ19 329 aa18.89■□□□□ 0.61
SDCBP2-201ENST00000339987 HSFY1Q96LI6 401 aa18.89■□□□□ 0.61
SDCBP2-201ENST00000339987 SEPT5Q99719 369 aaPredicted RBP18.89■□□□□ 0.61
SDCBP2-201ENST00000339987 PLEKHA4Q9H4M7 779 aa18.89■□□□□ 0.61
SDCBP2-201ENST00000339987 CYTH4Q9UIA0 394 aa18.89■□□□□ 0.61
SDCBP2-201ENST00000339987 EPN1Q9Y6I3 576 aaPredicted RBP18.89■□□□□ 0.61
SDCBP2-201ENST00000339987 EIF3CLB5ME19 914 aaKnown RBP18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 HHLA1C9JL84 531 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 TULP2O00295 520 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 PRRG1O14668 218 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 NDUFA10O95299 355 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 NSFP46459 744 aaKnown RBP18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 GFPT1Q06210 699 aaPredicted RBP18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 ACAD10Q6JQN1 1059 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 PMF1Q6P1K2 205 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 ALKBH5Q6P6C2 394 aaKnown RBP18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 PIGZQ86VD9 579 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 PHF13Q86YI8 300 aaPredicted RBP18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 SCN4BQ8IWT1 228 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 MSANTD4Q8NCY6 345 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 CPA5Q8WXQ8 436 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 SPATA17Q96L03 361 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 KCNK16Q96T55 309 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 EIF3CQ99613 913 aaKnown RBP18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 SLC4A5Q9BY07 1137 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 ISCUQ9H1K1 167 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 KCNF1Q9H3M0 494 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 SPTLC3Q9NUV7 552 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 DPP7Q9UHL4 492 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 YIPF1Q9Y548 306 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 INSL5Q9Y5Q6 135 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 MYO7AQ13402 2215 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 PATJQ8NI35 1801 aa18.88■□□□□ 0.61
SDCBP2-201ENST00000339987 CHD7Q9P2D1 2997 aa18.87■□□□□ 0.61
SDCBP2-201ENST00000339987 MYH10P35580 1976 aa18.87■□□□□ 0.61
SDCBP2-201ENST00000339987 RTN2O75298 545 aa18.87■□□□□ 0.61
SDCBP2-201ENST00000339987 ACADSBP45954 432 aa18.87■□□□□ 0.61
SDCBP2-201ENST00000339987 NRIP1P48552 1158 aa18.87■□□□□ 0.61
SDCBP2-201ENST00000339987 PLD1Q13393 1074 aa18.87■□□□□ 0.61
SDCBP2-201ENST00000339987 MTF1Q14872 753 aa18.87■□□□□ 0.61
SDCBP2-201ENST00000339987 LIN9Q5TKA1 542 aa18.87■□□□□ 0.61
SDCBP2-201ENST00000339987 TAS2R14Q9NYV8 317 aa18.87■□□□□ 0.61
SDCBP2-201ENST00000339987 HCFC2Q9Y5Z7 792 aa18.87■□□□□ 0.61
SDCBP2-201ENST00000339987 MTCL1Q9Y4B5 1905 aaKnown RBP18.87■□□□□ 0.61
SDCBP2-201ENST00000339987 MYO9BQ13459 2157 aa18.87■□□□□ 0.61
SDCBP2-201ENST00000339987 LAMA2P24043 3122 aaKnown RBP18.87■□□□□ 0.61
SDCBP2-201ENST00000339987 ZNF263O14978 683 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 PER2O15055 1255 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 SPATA31D3P0C874 917 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 EPCAMP16422 314 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 ATF6P18850 670 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 MMP8P22894 467 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 ALDH1A3P47895 512 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 GPR15P49685 360 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 SNX16P57768 344 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 KCNC3Q14003 757 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 DDR2Q16832 855 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 PTPN20Q4JDL3 420 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 RAB41Q5JT25 222 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 CCDC122Q5T0U0 273 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 C10orf76Q5T2E6 689 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 ELMSAN1Q6PJG2 1045 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 SPATA31D4Q6ZUB0 917 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 TMEM110Q86TL2 294 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 RBM23Q86U06 439 aaKnown RBP18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 ERICH1Q86X53 443 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 IPO4Q8TEX9 1081 aaKnown RBP18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 VCPIP1Q96JH7 1222 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 PPP1R13BQ96KQ4 1090 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 CPXM1Q96SM3 734 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 MIS12Q9H081 205 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 MTCH2Q9Y6C9 303 aa18.86■□□□□ 0.61
SDCBP2-201ENST00000339987 TNFRSF10BO14763 440 aa18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 SOAT2O75908 522 aa18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 IPO7O95373 1038 aaKnown RBP18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 FTLP02792 175 aaPredicted RBP18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 C8AP07357 584 aa18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 HOXA9P31269 272 aa18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 GABRB2P47870 512 aa18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 RGS7P49802 495 aa18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 C1QBPQ07021 282 aaKnown RBP18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 PTP4A2Q12974 167 aa18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 ADGRE1Q14246 886 aa18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 SPA17Q15506 151 aa18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 TCEAL5Q5H9L2 206 aa18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 MON1BQ7L1V2 547 aa18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 SLC7A14Q8TBB6 771 aa18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 MAN1C1Q9NR34 630 aa18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 COMMD8Q9NX08 183 aa18.85■□□□□ 0.61
SDCBP2-201ENST00000339987 TMCO5BA8MYB1 307 aa18.84■□□□□ 0.61
SDCBP2-201ENST00000339987 ZMYND10O75800 440 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms