RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 RNASE12Q5GAN4 147 aaKnown RBP3.25□□□□□ -1.89
XRCC4-202ENST00000338635 UBAP2Q5T6F2 1119 aaKnown RBP3.25□□□□□ -1.89
XRCC4-202ENST00000338635 PIP4P1Q86T03 277 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 PIM3Q86V86 326 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 PPP1R3BQ86XI6 285 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 ZBTB8BQ8NAP8 495 aaPredicted RBP3.25□□□□□ -1.89
XRCC4-202ENST00000338635 PCSK9Q8NBP7 692 aaKnown RBP3.25□□□□□ -1.89
XRCC4-202ENST00000338635 ZNF398Q8TD17 642 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 SOCS4Q8WXH5 440 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 THOC3Q96J01 351 aaKnown RBP3.25□□□□□ -1.89
XRCC4-202ENST00000338635 FYTTD1Q96QD9 318 aaKnown RBP3.25□□□□□ -1.89
XRCC4-202ENST00000338635 CTAGE1Q96RT6 745 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 TMEM184CQ9NVA4 438 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 HEY2Q9UBP5 337 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 PCDHA1Q9Y5I3 950 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 ZMYM2Q9UBW7 1377 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 TTC3P53804 2025 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 hCG_1984214I3L0E3 225 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 GTPBP1O00178 669 aaKnown RBP3.25□□□□□ -1.89
XRCC4-202ENST00000338635 AP4M1O00189 453 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 GCATO75600 419 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 MYCLP12524 364 aaPredicted RBP3.25□□□□□ -1.89
XRCC4-202ENST00000338635 ME1P48163 572 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 HK3P52790 923 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 ADKP55263 362 aaKnown RBP3.25□□□□□ -1.89
XRCC4-202ENST00000338635 THEMIS2Q5TEJ8 643 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 EFCAB2Q5VUJ9 269 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 Q6ZTC4 211 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 USP43Q70EL4 1123 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 ZNF548Q8NEK5 533 aaPredicted RBP3.25□□□□□ -1.89
XRCC4-202ENST00000338635 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.25□□□□□ -1.89
XRCC4-202ENST00000338635 OSR1Q8TAX0 266 aaPredicted RBP3.25□□□□□ -1.89
XRCC4-202ENST00000338635 ASIC5Q9NY37 505 aa3.25□□□□□ -1.89
XRCC4-202ENST00000338635 FEZ2Q9UHY8 353 aaPredicted RBP3.25□□□□□ -1.89
XRCC4-202ENST00000338635 MRPS17Q9Y2R5 130 aaKnown RBP3.25□□□□□ -1.89
XRCC4-202ENST00000338635 BTBD19C9JJ37 291 aa3.24□□□□□ -1.89
XRCC4-202ENST00000338635 SLC16A6O15403 523 aa3.24□□□□□ -1.89
XRCC4-202ENST00000338635 TLR2O60603 784 aa3.24□□□□□ -1.89
XRCC4-202ENST00000338635 CDKN2AP42771 156 aaKnown RBP3.24□□□□□ -1.89
XRCC4-202ENST00000338635 PDE6CP51160 858 aa3.24□□□□□ -1.89
XRCC4-202ENST00000338635 E2F1Q01094 437 aa3.24□□□□□ -1.89
XRCC4-202ENST00000338635 EXOSC9Q06265 439 aaKnown RBP3.24□□□□□ -1.89
XRCC4-202ENST00000338635 ABCB5Q2M3G0 1257 aa3.24□□□□□ -1.89
XRCC4-202ENST00000338635 DEPDC1Q5TB30 811 aa3.24□□□□□ -1.89
XRCC4-202ENST00000338635 BCDIN3DQ7Z5W3 292 aaKnown RBP3.24□□□□□ -1.89
XRCC4-202ENST00000338635 MAP4K1Q92918 833 aa3.24□□□□□ -1.89
XRCC4-202ENST00000338635 MOGAT1Q96PD6 335 aa3.24□□□□□ -1.89
XRCC4-202ENST00000338635 TRMOQ9BU70 441 aa3.24□□□□□ -1.89
XRCC4-202ENST00000338635 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
XRCC4-202ENST00000338635 TYRP14679 529 aa3.23□□□□□ -1.89
XRCC4-202ENST00000338635 HDCP19113 662 aa3.23□□□□□ -1.89
XRCC4-202ENST00000338635 ID2Q02363 134 aa3.23□□□□□ -1.89
XRCC4-202ENST00000338635 SRSF1Q07955 248 aaKnown RBP eCLIP3.23□□□□□ -1.89
XRCC4-202ENST00000338635 CYP1B1Q16678 543 aa3.23□□□□□ -1.89
XRCC4-202ENST00000338635 LY6KQ17RY6 165 aa3.23□□□□□ -1.89
XRCC4-202ENST00000338635 SYDE2Q5VT97 1194 aa3.23□□□□□ -1.89
XRCC4-202ENST00000338635 LVRNQ6Q4G3 990 aa3.23□□□□□ -1.89
XRCC4-202ENST00000338635 COLCA1Q6ZS62 124 aa3.23□□□□□ -1.89
XRCC4-202ENST00000338635 CAND1Q86VP6 1230 aaKnown RBP3.23□□□□□ -1.89
XRCC4-202ENST00000338635 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.23□□□□□ -1.89
XRCC4-202ENST00000338635 OSCP1Q8WVF1 389 aa3.23□□□□□ -1.89
XRCC4-202ENST00000338635 PPP1R10Q96QC0 940 aaKnown RBP3.23□□□□□ -1.89
XRCC4-202ENST00000338635 MMS19Q96T76 1030 aa3.23□□□□□ -1.89
XRCC4-202ENST00000338635 LMBRD1Q9NUN5 540 aa3.23□□□□□ -1.89
XRCC4-202ENST00000338635 PNPOQ9NVS9 261 aa3.23□□□□□ -1.89
XRCC4-202ENST00000338635 MCM8Q9UJA3 840 aa3.23□□□□□ -1.89
XRCC4-202ENST00000338635 SHOC2Q9UQ13 582 aa3.23□□□□□ -1.89
XRCC4-202ENST00000338635 HS3ST3B1Q9Y662 390 aa3.23□□□□□ -1.89
XRCC4-202ENST00000338635 B4DGG1 531 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 RNF8O76064 485 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 UNC5CO95185 931 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 TOMM40O96008 361 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 FGAP02671 866 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 CSF1RP07333 972 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 T-ENOLP0DO92 83 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 ADORA2AP29274 412 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 KRT85P78386 507 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 DEF8Q6ZN54 512 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 DPY19L3Q6ZPD9 716 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 NECAB2Q7Z6G3 386 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 PNMA8AQ86V59 439 aaPredicted RBP3.22□□□□□ -1.89
XRCC4-202ENST00000338635 DDX42Q86XP3 938 aaKnown RBP eCLIP3.22□□□□□ -1.89
XRCC4-202ENST00000338635 IZUMO1Q8IYV9 350 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 ABRAQ8N0Z2 381 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 ARFGAP1Q8N6T3 406 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 SIRT6Q8N6T7 355 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 PNISRQ8TF01 805 aaKnown RBP3.22□□□□□ -1.89
XRCC4-202ENST00000338635 CAMK1GQ96NX5 476 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 PRR25Q96S07 402 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 FAM234AQ9H0X4 552 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 AMFRQ9UKV5 643 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 PLEKHM1Q9Y4G2 1056 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 NOTCH4Q99466 2003 aa3.22□□□□□ -1.89
XRCC4-202ENST00000338635 SHTN1A0MZ66 631 aa3.21□□□□□ -1.89
XRCC4-202ENST00000338635 TULP3O75386 442 aa3.21□□□□□ -1.89
XRCC4-202ENST00000338635 VNN1O95497 513 aa3.21□□□□□ -1.89
XRCC4-202ENST00000338635 MT-CO3P00414 261 aa3.21□□□□□ -1.89
XRCC4-202ENST00000338635 FTLP02792 175 aaPredicted RBP3.21□□□□□ -1.89
XRCC4-202ENST00000338635 GRPP07492 148 aa3.21□□□□□ -1.89
XRCC4-202ENST00000338635 PDCP20941 246 aa3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms