RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 SECISBP2LQ93073 1101 aaKnown RBP18.51■□□□□ 0.55
CHGA-202ENST00000334654 PPP2R3CQ969Q6 453 aa18.51■□□□□ 0.55
CHGA-202ENST00000334654 SEPT5Q99719 369 aaPredicted RBP18.51■□□□□ 0.55
CHGA-202ENST00000334654 DMAP1Q9NPF5 467 aaPredicted RBP18.51■□□□□ 0.55
CHGA-202ENST00000334654 HESX1Q9UBX0 185 aa18.51■□□□□ 0.55
CHGA-202ENST00000334654 INSL5Q9Y5Q6 135 aa18.51■□□□□ 0.55
CHGA-202ENST00000334654 SSU72P8A0A1W2PR75 194 aa18.5■□□□□ 0.55
CHGA-202ENST00000334654 XPO1O14980 1071 aaKnown RBP18.5■□□□□ 0.55
CHGA-202ENST00000334654 ZMYND10O75800 440 aa18.5■□□□□ 0.55
CHGA-202ENST00000334654 PAPLNO95428 1278 aa18.5■□□□□ 0.55
CHGA-202ENST00000334654 C8AP07357 584 aa18.5■□□□□ 0.55
CHGA-202ENST00000334654 UNGP13051 313 aaPredicted RBP18.5■□□□□ 0.55
CHGA-202ENST00000334654 EIF4A3P38919 411 aaKnown RBP18.5■□□□□ 0.55
CHGA-202ENST00000334654 GRIK1P39086 918 aa18.5■□□□□ 0.55
CHGA-202ENST00000334654 RPL34P49207 117 aaKnown RBP18.5■□□□□ 0.55
CHGA-202ENST00000334654 GSDMDP57764 484 aa18.5■□□□□ 0.55
CHGA-202ENST00000334654 NOMO3P69849 1222 aa18.5■□□□□ 0.55
CHGA-202ENST00000334654 CTC1Q2NKJ3 1217 aa18.5■□□□□ 0.55
CHGA-202ENST00000334654 TSR1Q2NL82 804 aaKnown RBP18.5■□□□□ 0.55
CHGA-202ENST00000334654 TDRD12Q587J7 1177 aaKnown RBP18.5■□□□□ 0.55
CHGA-202ENST00000334654 SCN4BQ8IWT1 228 aa18.5■□□□□ 0.55
CHGA-202ENST00000334654 STKLD1Q8NE28 680 aa18.5■□□□□ 0.55
CHGA-202ENST00000334654 UBXN6Q9BZV1 441 aa18.5■□□□□ 0.55
CHGA-202ENST00000334654 ZNHIT6Q9NWK9 470 aaKnown RBP18.5■□□□□ 0.55
CHGA-202ENST00000334654 PRRG1O14668 218 aa18.49■□□□□ 0.55
CHGA-202ENST00000334654 RFPL2O75678 378 aa18.49■□□□□ 0.55
CHGA-202ENST00000334654 SETSIPP0DME0 302 aa18.49■□□□□ 0.55
CHGA-202ENST00000334654 TNFAIP3P21580 790 aa18.49■□□□□ 0.55
CHGA-202ENST00000334654 PLA2G4AP47712 749 aa18.49■□□□□ 0.55
CHGA-202ENST00000334654 CCDC149Q6ZUS6 474 aa18.49■□□□□ 0.55
CHGA-202ENST00000334654 RTL10Q7L3V2 364 aa18.49■□□□□ 0.55
CHGA-202ENST00000334654 GPRIN1Q7Z2K8 1008 aa18.49■□□□□ 0.55
CHGA-202ENST00000334654 PIGZQ86VD9 579 aa18.49■□□□□ 0.55
CHGA-202ENST00000334654 GPR152Q8TDT2 470 aa18.49■□□□□ 0.55
CHGA-202ENST00000334654 STK32AQ8WU08 396 aa18.49■□□□□ 0.55
CHGA-202ENST00000334654 SPATA17Q96L03 361 aa18.49■□□□□ 0.55
CHGA-202ENST00000334654 PPP1R9BQ96SB3 815 aa18.49■□□□□ 0.55
CHGA-202ENST00000334654 ADAMTS1Q9UHI8 967 aa18.49■□□□□ 0.55
CHGA-202ENST00000334654 NENFQ9UMX5 172 aa18.49■□□□□ 0.55
CHGA-202ENST00000334654 NOTCH4Q99466 2003 aa18.49■□□□□ 0.55
CHGA-202ENST00000334654 A0A087X0T9 212 aa18.48■□□□□ 0.55
CHGA-202ENST00000334654 TRIM66O15016 1216 aa18.48■□□□□ 0.55
CHGA-202ENST00000334654 FAM228BP0C875 321 aa18.48■□□□□ 0.55
CHGA-202ENST00000334654 RPL10AP62906 217 aaKnown RBP18.48■□□□□ 0.55
CHGA-202ENST00000334654 TWF1Q12792 350 aa18.48■□□□□ 0.55
CHGA-202ENST00000334654 CLEC16AQ2KHT3 1053 aa18.48■□□□□ 0.55
CHGA-202ENST00000334654 RAB41Q5JT25 222 aa18.48■□□□□ 0.55
CHGA-202ENST00000334654 C1orf131Q8NDD1 294 aaKnown RBP18.48■□□□□ 0.55
CHGA-202ENST00000334654 SLC4A5Q9BY07 1137 aa18.48■□□□□ 0.55
CHGA-202ENST00000334654 NHEJ1Q9H9Q4 299 aaPredicted RBP18.48■□□□□ 0.55
CHGA-202ENST00000334654 PNPLA8Q9NP80 782 aa18.48■□□□□ 0.55
CHGA-202ENST00000334654 TAS2R14Q9NYV8 317 aa18.48■□□□□ 0.55
CHGA-202ENST00000334654 IL37Q9NZH6 218 aa18.48■□□□□ 0.55
CHGA-202ENST00000334654 TJP2Q9UDY2 1190 aa18.48■□□□□ 0.55
CHGA-202ENST00000334654 LSM8O95777 96 aaKnown RBP18.47■□□□□ 0.55
CHGA-202ENST00000334654 HOXA9P31269 272 aa18.47■□□□□ 0.55
CHGA-202ENST00000334654 MTMR3Q13615 1198 aa18.47■□□□□ 0.55
CHGA-202ENST00000334654 LIN9Q5TKA1 542 aa18.47■□□□□ 0.55
CHGA-202ENST00000334654 TRIM72Q6ZMU5 477 aa18.47■□□□□ 0.55
CHGA-202ENST00000334654 TMEM35BQ8NCS4 154 aa18.47■□□□□ 0.55
CHGA-202ENST00000334654 GIPC2Q8TF65 315 aa18.47■□□□□ 0.55
CHGA-202ENST00000334654 CPA5Q8WXQ8 436 aa18.47■□□□□ 0.55
CHGA-202ENST00000334654 KCTD13Q8WZ19 329 aa18.47■□□□□ 0.55
CHGA-202ENST00000334654 ZNF707Q96C28 371 aaPredicted RBP18.47■□□□□ 0.55
CHGA-202ENST00000334654 CEP295NLQ96MC4 621 aa18.47■□□□□ 0.55
CHGA-202ENST00000334654 CPXM1Q96SM3 734 aa18.47■□□□□ 0.55
CHGA-202ENST00000334654 CLEC1BQ9P126 229 aa18.47■□□□□ 0.55
CHGA-202ENST00000334654 C2orf16Q68DN1 1984 aa18.47■□□□□ 0.55
CHGA-202ENST00000334654 FAM170AA1A519 330 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 GOLGA6L6A8MZA4 724 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 HMGA1P17096 107 aaKnown RBP18.46■□□□□ 0.55
CHGA-202ENST00000334654 LTBRP36941 435 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 ALDH1A3P47895 512 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 RGS7P49802 495 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 KIF11P52732 1056 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 USP46P62068 366 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 CENPCQ03188 943 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 DLX2Q07687 328 aaPredicted RBP18.46■□□□□ 0.55
CHGA-202ENST00000334654 PDCLQ13371 301 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 PTPN20Q4JDL3 420 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 PPM1LQ5SGD2 360 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 NAA35Q5VZE5 725 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 SYCE2Q6PIF2 218 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 CYP26C1Q6V0L0 522 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 TMEM110Q86TL2 294 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 DNAAF5Q86Y56 855 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 LRRC8AQ8IWT6 810 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 C12orf76Q8N812 135 aaPredicted RBP18.46■□□□□ 0.55
CHGA-202ENST00000334654 SCAMP5Q8TAC9 235 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 CASP10Q92851 521 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 HSFY1Q96LI6 401 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 PDCL3Q9H2J4 239 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 ZDHHC7Q9NXF8 308 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 DPP7Q9UHL4 492 aa18.46■□□□□ 0.55
CHGA-202ENST00000334654 SLC38A8A6NNN8 435 aa18.46■□□□□ 0.54
CHGA-202ENST00000334654 ZNF263O14978 683 aa18.46■□□□□ 0.54
CHGA-202ENST00000334654 HNRNPA1P09651 372 aaKnown RBP eCLIP18.46■□□□□ 0.54
CHGA-202ENST00000334654 GZMAP12544 262 aa18.46■□□□□ 0.54
CHGA-202ENST00000334654 ANXA13P27216 316 aa18.46■□□□□ 0.54
CHGA-202ENST00000334654 SLC5A3P53794 718 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms