RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 H0YIN7 160 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 BAG2O95816 211 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 KBTBD12Q3ZCT8 623 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 LGSNQ5TDP6 509 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 ATG16L1Q676U5 607 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 BBS12Q6ZW61 710 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 POLNQ7Z5Q5 900 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 GALNT15Q8N3T1 639 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 SERAC1Q96JX3 654 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 TMEM39BQ9GZU3 492 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 KCNK13Q9HB14 408 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 PIDD1Q9HB75 910 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 STRIP2Q9ULQ0 834 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 EFR3BQ9Y2G0 817 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.27■□□□□ 0.03
SSBP3-201ENST00000326956 SCN9AQ15858 1988 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 E7ESA3 106 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 SPECC1L-ADORA2AF8WAN1 911 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 AP1G2O75843 785 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 TMEM63AO94886 807 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 RBP3P10745 1247 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 KRT3P12035 628 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 ALYREFQ86V81 257 aaKnown RBP15.27■□□□□ 0.03
SSBP3-201ENST00000326956 UNC45BQ8IWX7 931 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 TMEM143Q96AN5 459 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 TRAPPC9Q96Q05 1148 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 TARS2Q9BW92 718 aaKnown RBP15.27■□□□□ 0.03
SSBP3-201ENST00000326956 CALN1Q9BXU9 219 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 ZNF518BQ9C0D4 1074 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 PDP2Q9P2J9 529 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 NRXN2Q9P2S2 1712 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 CNTN6Q9UQ52 1028 aa15.27■□□□□ 0.03
SSBP3-201ENST00000326956 ZNF541Q9H0D2 1346 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 SIGLEC16A6NMB1 481 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 KBTBD13C9JR72 458 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 WDR46O15213 610 aaKnown RBP15.26■□□□□ 0.03
SSBP3-201ENST00000326956 KRT37O76014 449 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 CD19P15391 556 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 ERFP50548 548 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 AP2B1P63010 937 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 KDSRQ06136 332 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 SEZ6Q53EL9 994 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 MDH1BQ5I0G3 518 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 SYCP2LQ5T4T6 812 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 OR52E8Q6IFG1 317 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 THNSL1Q8IYQ7 743 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 PPM1NQ8N819 430 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 SLC44A1Q8WWI5 657 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 CFAP36Q96G28 342 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 RILPQ96NA2 401 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 TCHPQ9BT92 498 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 PCSK1NQ9UHG2 260 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 TCRBV9S1A1TA0A576 114 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 TRIM49D1C9J1S8 452 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 UBTFL6P0CB48 400 aaPredicted RBP15.26■□□□□ 0.03
SSBP3-201ENST00000326956 NEK3P51956 506 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 TRPC3Q13507 836 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 EMC2Q15006 297 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 ZBTB41Q5SVQ8 909 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 DARS2Q6PI48 645 aaKnown RBP15.26■□□□□ 0.03
SSBP3-201ENST00000326956 SCUBE1Q8IWY4 988 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 SRPK1Q96SB4 655 aaKnown RBP15.26■□□□□ 0.03
SSBP3-201ENST00000326956 TTC1Q99614 292 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 WWP1Q9H0M0 922 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 WASF2Q9Y6W5 498 aa15.26■□□□□ 0.03
SSBP3-201ENST00000326956 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.26■□□□□ 0.03
SSBP3-201ENST00000326956 SPAG6O75602 509 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 DHRS4L1P0CG22 281 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 KDELR1P24390 212 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 RFC1P35251 1148 aaPredicted RBP15.25■□□□□ 0.03
SSBP3-201ENST00000326956 DPYSL3Q14195 570 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 ARID3BQ8IVW6 561 aaPredicted RBP15.25■□□□□ 0.03
SSBP3-201ENST00000326956 NIPA2Q8N8Q9 360 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 HSPH1Q92598 858 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 GPRASP2Q96D09 838 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 GJD4Q96KN9 370 aaPredicted RBP15.25■□□□□ 0.03
SSBP3-201ENST00000326956 ACAP3Q96P50 834 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 THTPAQ9BU02 230 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 NDE1Q9NXR1 346 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 KCNK4Q9NYG8 393 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 WDR35Q9P2L0 1181 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 FBXO40Q9UH90 709 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 NR3C2P08235 984 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 WEE2P0C1S8 567 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 KITP10721 976 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 AMPD1P23109 780 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 ETV4P43268 484 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 BAATQ14032 418 aaPredicted RBP15.25■□□□□ 0.03
SSBP3-201ENST00000326956 TRMT5Q32P41 509 aaKnown RBP15.25■□□□□ 0.03
SSBP3-201ENST00000326956 RASIP1Q5U651 963 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 TTC39BQ5VTQ0 682 aaPredicted RBP15.25■□□□□ 0.03
SSBP3-201ENST00000326956 SCARA5Q6ZMJ2 495 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 CDAN1Q8IWY9 1227 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 SEPT12Q8IYM1 358 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.25■□□□□ 0.03
SSBP3-201ENST00000326956 SPATA18Q8TC71 538 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 FAF2Q96CS3 445 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 SLC38A10Q9HBR0 1119 aa15.25■□□□□ 0.03
SSBP3-201ENST00000326956 JPH1Q9HDC5 661 aaPredicted RBP15.25■□□□□ 0.03
SSBP3-201ENST00000326956 CISHQ9NSE2 258 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms