RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	CES3	Q6UWW8	571 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	GPR142	Q7Z601	462 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	TMEM192	Q8IY95	271 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	SLC25A41	Q8N5S1	370 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	EXD1	Q8NHP7	514 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	PLEKHO2	Q8TD55	490 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	C18orf25	Q96B23	403 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	KATNAL1	Q9BW62	490 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	UNK	Q9C0B0	810 aa	Known RBP	12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	BARX2	Q9UMQ3	279 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	R3HDM2	Q9Y2K5	976 aa	Known RBP	12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	MAPK13	O15264	365 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	MEFV	O15553	781 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	PSTPIP1	O43586	416 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	USP12	O75317	370 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	ZNF200	P98182	395 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	SV2C	Q496J9	727 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	BOLA3	Q53S33	107 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	HABP4	Q5JVS0	413 aa	Known RBP	12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	LVRN	Q6Q4G3	990 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	LRIG3	Q6UXM1	1119 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	TTC39C	Q8N584	583 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	IPMK	Q8NFU5	416 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	JOSD2	Q8TAC2	188 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	CNPY3	Q9BT09	278 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	ZBED2	Q9BTP6	218 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	SHCBP1L	Q9BZQ2	653 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	CXorf56	Q9H5V9	222 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	GPR25	O00155	361 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	STRN	O43815	780 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	PPFIA2	O75334	1257 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	HSPA4L	O95757	839 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	CFH	P08603	1231 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	EIF4B	P23588	611 aa	Known RBP	12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	MAGEA9	P43362	315 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	MMP14	P50281	582 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	MFSD10	Q14728	455 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	NDRG1	Q92597	394 aa	Known RBP	12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	RMDN2	Q96LZ7	410 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	TEPSIN	Q96N21	525 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	NUDCD1	Q96RS6	583 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	NXF3	Q9H4D5	531 aa	Known RBP	12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	CYP4F11	Q9HBI6	524 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	KRT82	Q9NSB4	513 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	HAUS2	Q9NVX0	235 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	TRIM49D1	C9J1S8	452 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	TRPA1	O75762	1119 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	LYPLA2	O95372	231 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	SERPINB6	P35237	376 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	SGF29	Q96ES7	293 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	EPAS1	Q99814	870 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	GDF3	Q9NR23	364 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	DDX43	Q9NXZ2	648 aa	Known RBP	12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	RBPJL	Q9UBG7	517 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	CIC	Q96RK0	1608 aa	Predicted RBP	12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	FAM47DP	A6NHR8	397 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	CASP2	P42575	452 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	CPA2	P48052	419 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	NOMO3	P69849	1222 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	CENPC	Q03188	943 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	KYAT1	Q16773	422 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	MUM1	Q2TAK8	710 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	SLC27A1	Q6PCB7	646 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	USP50	Q70EL3	339 aa	Predicted RBP	12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	NDUFAF2	Q8N183	169 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	MTMR14	Q8NCE2	650 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	HES6	Q96HZ4	224 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	ARHGAP28	Q9P2N2	729 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	CACNG4	Q9UBN1	327 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	SUFU	Q9UMX1	484 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	AP4E1	Q9UPM8	1137 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	MYO7A	Q13402	2215 aa		12.33	□□□□□ -0.44
DDR1-223	ENST00000324771	ENDOD1	O94919	500 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	TH	P07101	528 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	TKTL1	P51854	596 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	CCNG2	Q16589	344 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	SPATA21	Q7Z572	469 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	CRLF3	Q8IUI8	442 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	ZNF669	Q96BR6	464 aa	Predicted RBP	12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	MFSD14A	Q96MC6	490 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	FAM111A	Q96PZ2	611 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	NEUROG2	Q9H2A3	272 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	APOBEC3G	Q9HC16	384 aa	Known RBP	12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	DMAC2	Q9NW81	257 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	GEMIN8	Q9NWZ8	242 aa	Known RBP	12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	SPDYE5	A6NIY4	337 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	MCF2	P10911	925 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	GCK	P35557	465 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	ABCG1	P45844	678 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	ARFIP2	P53365	341 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	RABGGTB	P53611	331 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	STIL	Q15468	1287 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	MMEL1	Q495T6	779 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	ARHGAP24	Q8N264	748 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	URGCP	Q8TCY9	931 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	CAVIN3	Q969G5	261 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	ATP6V1E2	Q96A05	226 aa		12.32	□□□□□ -0.44
DDR1-223	ENST00000324771	CCDC124	Q96CT7	223 aa	Known RBP	12.32	□□□□□ -0.44

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