RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 CPA6Q8N4T0 437 aa18.9■□□□□ 0.62
TPM1-203ENST00000317516 TTC16Q8NEE8 873 aa18.9■□□□□ 0.62
TPM1-203ENST00000317516 OSCP1Q8WVF1 389 aa18.9■□□□□ 0.62
TPM1-203ENST00000317516 SLITRK1Q96PX8 696 aa18.9■□□□□ 0.62
TPM1-203ENST00000317516 DPEP3Q9H4B8 488 aa18.9■□□□□ 0.62
TPM1-203ENST00000317516 HPS4Q9NQG7 708 aa18.9■□□□□ 0.62
TPM1-203ENST00000317516 RBM12Q9NTZ6 932 aaKnown RBP18.9■□□□□ 0.62
TPM1-203ENST00000317516 DUS2Q9NX74 493 aaKnown RBP18.9■□□□□ 0.62
TPM1-203ENST00000317516 GCNT4Q9P109 453 aa18.9■□□□□ 0.62
TPM1-203ENST00000317516 ARHGAP26Q9UNA1 814 aa18.9■□□□□ 0.62
TPM1-203ENST00000317516 MIA3Q5JRA6 1907 aa18.9■□□□□ 0.62
TPM1-203ENST00000317516 EP300Q09472 2414 aaPredicted RBP18.89■□□□□ 0.61
TPM1-203ENST00000317516 C2orf78A6NCI8 922 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 TRDMT1O14717 391 aaKnown RBP18.89■□□□□ 0.61
TPM1-203ENST00000317516 PRR29P0C7W0 189 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 KRT13P13646 458 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 TCF3P15923 654 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 NR2F2P24468 414 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 IFNAR2P48551 515 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 VAMP7P51809 220 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 CDH8P55286 799 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 DLG4P78352 724 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 CCINQ13939 588 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 GAS6Q14393 721 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 INTS8Q75QN2 995 aaKnown RBP18.89■□□□□ 0.61
TPM1-203ENST00000317516 ATP2A3Q93084 1043 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 SLC22A12Q96S37 553 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 MED10Q9BTT4 135 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 B3GNT5Q9BYG0 378 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 IMPG2Q9BZV3 1241 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 ZNF518BQ9C0D4 1074 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 EPC1Q9H2F5 836 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 SMYD3Q9H7B4 428 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 NCDNQ9UBB6 729 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 RAB23Q9ULC3 237 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 NME7Q9Y5B8 376 aa18.89■□□□□ 0.61
TPM1-203ENST00000317516 ZNF840PA6NDX5 716 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 ATG13O75143 517 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 RTN3O95197 1032 aaPredicted RBP18.88■□□□□ 0.61
TPM1-203ENST00000317516 PAPSS2O95340 614 aaPredicted RBP18.88■□□□□ 0.61
TPM1-203ENST00000317516 VNN1O95497 513 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 ABL1P00519 1130 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 TDGF1P13385 188 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 ARSAP15289 507 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 USP46P62068 366 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 NUCB2P80303 420 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 SATB1Q01826 763 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 ENPEPQ07075 957 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 ADAM9Q13443 819 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 ZNF77Q15935 545 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 NUP93Q8N1F7 819 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 GPR161Q8N6U8 529 aaKnown RBP18.88■□□□□ 0.61
TPM1-203ENST00000317516 SH3RF2Q8TEC5 729 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 DNAI2Q9GZS0 605 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 GOLPH3LQ9H4A5 285 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 ECT2Q9H8V3 914 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 GDPD2Q9HCC8 539 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 MAPK8IP1Q9UQF2 711 aa18.88■□□□□ 0.61
TPM1-203ENST00000317516 CLDN5O00501 218 aa18.87■□□□□ 0.61
TPM1-203ENST00000317516 DRD1P21728 446 aa18.87■□□□□ 0.61
TPM1-203ENST00000317516 YWHAQP27348 245 aa18.87■□□□□ 0.61
TPM1-203ENST00000317516 CNR2P34972 360 aa18.87■□□□□ 0.61
TPM1-203ENST00000317516 PSMC2P35998 433 aaKnown RBP18.87■□□□□ 0.61
TPM1-203ENST00000317516 PIK3CAP42336 1068 aa18.87■□□□□ 0.61
TPM1-203ENST00000317516 TAF10Q12962 218 aa18.87■□□□□ 0.61
TPM1-203ENST00000317516 USP4Q13107 963 aa18.87■□□□□ 0.61
TPM1-203ENST00000317516 TMEM196Q5HYL7 178 aa18.87■□□□□ 0.61
TPM1-203ENST00000317516 SCARA5Q6ZMJ2 495 aa18.87■□□□□ 0.61
TPM1-203ENST00000317516 Q6ZS52 159 aa18.87■□□□□ 0.61
TPM1-203ENST00000317516 GVINP1Q7Z2Y8 2422 aa18.87■□□□□ 0.61
TPM1-203ENST00000317516 UNC93AQ86WB7 457 aa18.87■□□□□ 0.61
TPM1-203ENST00000317516 KIAA1958Q8N8K9 716 aa18.87■□□□□ 0.61
TPM1-203ENST00000317516 CCDC150Q8NCX0 1101 aa18.87■□□□□ 0.61
TPM1-203ENST00000317516 PDZD8Q8NEN9 1154 aa18.87■□□□□ 0.61
TPM1-203ENST00000317516 RMND1Q9NWS8 449 aa18.87■□□□□ 0.61
TPM1-203ENST00000317516 MYO15AQ9UKN7 3530 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 OTOL1A6NHN0 477 aaPredicted RBP18.86■□□□□ 0.61
TPM1-203ENST00000317516 AKAP3O75969 853 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 ASS1P00966 412 aaKnown RBP18.86■□□□□ 0.61
TPM1-203ENST00000317516 HOXA6P31267 233 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 RAP1GAPP47736 663 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 ID4P47928 161 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 GALK1P51570 392 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 SLC7A9P82251 487 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 FBXO43Q4G163 708 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 FAM186BQ8IYM0 893 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 KIAA2013Q8IYS2 634 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 CRYBG2Q8N1P7 616 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 CCDC26Q8TAB7 109 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 RIN3Q8TB24 985 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 OVCA2Q8WZ82 227 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 SMARCD1Q96GM5 515 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 P2RY13Q9BPV8 354 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 DMAP1Q9NPF5 467 aaPredicted RBP18.86■□□□□ 0.61
TPM1-203ENST00000317516 COMMD8Q9NX08 183 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 SMG5Q9UPR3 1016 aaKnown RBP18.86■□□□□ 0.61
TPM1-203ENST00000317516 WNT6Q9Y6F9 365 aa18.86■□□□□ 0.61
TPM1-203ENST00000317516 TICRRQ7Z2Z1 1910 aa18.85■□□□□ 0.61
TPM1-203ENST00000317516 NFATC1O95644 943 aa18.85■□□□□ 0.61
TPM1-203ENST00000317516 HLA-DRAP01903 254 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms