RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CEP83Q9Y592 693 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 SZT2Q5T011 3432 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 A8MXQ7 604 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 CLDN5O00501 218 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 DIAPH2O60879 1101 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 CILPO75339 1184 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 PROSCO94903 275 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 IL18RAPO95256 599 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 GHRP10912 638 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 PRKAR2AP13861 404 aaKnown RBP7.99□□□□□ -1.13
TRIM55-202ENST00000315962 AKR1A1P14550 325 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 TFE3P19532 575 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-202ENST00000315962 PSMA2P25787 234 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 IL1R2P27930 398 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 CHKAP35790 457 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 MLH1P40692 756 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 ATXN1P54253 815 aaKnown RBP7.99□□□□□ -1.13
TRIM55-202ENST00000315962 MTMR3Q13615 1198 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 KCNA10Q16322 511 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 FAM102AQ5T9C2 384 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-202ENST00000315962 PMF1Q6P1K2 205 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 MFSD7Q6UXD7 560 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 DDX27Q96GQ7 796 aaKnown RBP7.99□□□□□ -1.13
TRIM55-202ENST00000315962 CFAP57Q96MR6 1250 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 RPS6KC1Q96S38 1066 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 GAD1Q99259 594 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 ACTR5Q9H9F9 607 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-202ENST00000315962 AGO3Q9H9G7 860 aaKnown RBP7.99□□□□□ -1.13
TRIM55-202ENST00000315962 GRHL1Q9NZI5 618 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 SAMD15Q9P1V8 674 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 INPP5FQ9Y2H2 1132 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 IPPQ9Y573 584 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 SCN4AP35499 1836 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 KAT6AQ92794 2004 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 CASTOR2A6NHX0 329 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 RRN3P2A6NIE6 340 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 A6NNZ2 444 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 MIF4GDA9UHW6 222 aaKnown RBP7.99□□□□□ -1.13
TRIM55-202ENST00000315962 CCDC188H7C350 402 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 POMCP01189 267 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 IFNB1P01574 187 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 RBP5P82980 135 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 SOWAHAQ2M3V2 549 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 TUBB8Q3ZCM7 444 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 AGBL2Q5U5Z8 902 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 DUPD1Q68J44 220 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 OR6B2Q6IFH4 312 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 PLEKHA7Q6IQ23 1121 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 GSTA5Q7RTV2 222 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 ARFGAP1Q8N6T3 406 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 UBR7Q8N806 425 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 SPOCK2Q92563 424 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 USP6NLQ92738 828 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 TLCD1Q96CP7 247 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 CALN1Q9BXU9 219 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 NFKBIZQ9BYH8 718 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 SLITRK6Q9H5Y7 841 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 FAM114A2Q9NRY5 505 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 GPATCH2LQ9NWQ4 482 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 ASIC3Q9UHC3 531 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 ST3GAL5Q9UNP4 418 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 CDY2AQ9Y6F7 541 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 LOXHD1Q8IVV2 1947 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 ATXN2Q99700 1313 aaKnown RBP7.99□□□□□ -1.13
TRIM55-202ENST00000315962 TMEM191CA6NGB0 347 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 PPFIA2O75334 1257 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 KRT1P04264 644 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 KRT16P08779 473 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 FGFR1P11362 822 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 LCP1P13796 627 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 YY1P25490 414 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 AP3M2P53677 418 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 MCCD1P59942 119 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-202ENST00000315962 MMRN1Q13201 1228 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 FAM187BQ17R55 369 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 TRIM68Q6AZZ1 485 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 TRPM8Q7Z2W7 1104 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 ZNF677Q86XU0 584 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 PHF13Q86YI8 300 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-202ENST00000315962 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-202ENST00000315962 MIEF2Q96C03 454 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 CALR3Q96L12 384 aaKnown RBP7.99□□□□□ -1.13
TRIM55-202ENST00000315962 PABPC3Q9H361 631 aaKnown RBP7.99□□□□□ -1.13
TRIM55-202ENST00000315962 ASB7Q9H672 318 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 ECT2Q9H8V3 914 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 MRPL47Q9HD33 250 aaKnown RBP7.99□□□□□ -1.13
TRIM55-202ENST00000315962 XPNPEP3Q9NQH7 507 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 CNTN6Q9UQ52 1028 aa7.99□□□□□ -1.13
TRIM55-202ENST00000315962 TRIP12Q14669 1992 aaPredicted RBP7.98□□□□□ -1.13
TRIM55-202ENST00000315962 TMEM120BA0PK00 339 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 MBLAC1A4D2B0 266 aaPredicted RBP7.98□□□□□ -1.13
TRIM55-202ENST00000315962 UNCXA6NJT0 531 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 GOLGA8MH3BSY2 632 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 CA12O43570 354 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 CHRNA1P02708 482 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 GPD2P43304 727 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 KRT17Q04695 432 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 SIX1Q15475 284 aaPredicted RBP7.98□□□□□ -1.13
TRIM55-202ENST00000315962 SURF1Q15526 300 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 GOLGA7BQ2TAP0 167 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms