RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 MGAT5BQ3V5L5 792 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 LIN9Q5TKA1 542 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 LLGL2Q6P1M3 1020 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 TRIM72Q6ZMU5 477 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 UBA3Q8TBC4 463 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 STK32AQ8WU08 396 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 CASP10Q92851 521 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 SECISBP2LQ93073 1101 aaKnown RBP13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 SPATA17Q96L03 361 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 IGFLR1Q9H665 355 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 PNPLA8Q9NP80 782 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 DZANK1Q9NVP4 752 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 PRRC2BQ5JSZ5 2229 aaKnown RBP13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 REV3LO60673 3130 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 SSU72P8A0A1W2PR75 194 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 DDX3XO00571 662 aaKnown RBP eCLIP13.37□□□□□ -0.272e-8■■■■■ 32.9
CHMP2A-201ENST00000312547 TNFRSF10BO14763 440 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 XPO1O14980 1071 aaKnown RBP13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 NCK2O43639 380 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 GABBR2O75899 941 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 LSM8O95777 96 aaKnown RBP13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 HNRNPA1P09651 372 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 UNGP13051 313 aaPredicted RBP13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 ANXA13P27216 316 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 GRIK1P39086 918 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 PLA2G4AP47712 749 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 MAP3K7CLP57077 242 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 GSDMDP57764 484 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 TWF1Q12792 350 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 PLD1Q13393 1074 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 DDR2Q16832 855 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 TSR1Q2NL82 804 aaKnown RBP13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 ASTE1Q2TB18 679 aaPredicted RBP13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 PIGZQ86VD9 579 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 PASD1Q8IV76 773 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 SCN4BQ8IWT1 228 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 CMASQ8NFW8 434 aaPredicted RBP13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 SLC30A5Q8TAD4 765 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 KCTD13Q8WZ19 329 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 ANP32BQ92688 251 aaKnown RBP13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 CHP1Q99653 195 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 ZNHIT6Q9NWK9 470 aaKnown RBP13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 ZDHHC7Q9NXF8 308 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 IL37Q9NZH6 218 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 CYTH4Q9UIA0 394 aa13.37□□□□□ -0.27
CHMP2A-201ENST00000312547 GOLGA6L6A8MZA4 724 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 RFPL2O75678 378 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 FOSL2P15408 326 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 ALDH1A3P47895 512 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 SLC8A3P57103 927 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 NOMO3P69849 1222 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 PDCLQ13371 301 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 CLEC16AQ2KHT3 1053 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 TDRD12Q587J7 1177 aaKnown RBP13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 RAB41Q5JT25 222 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 PPM1LQ5SGD2 360 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 SDHAF4Q5VUM1 108 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 ANKRD54Q6NXT1 300 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 PMF1Q6P1K2 205 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 ELMSAN1Q6PJG2 1045 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 CCDC186Q7Z3E2 898 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 TMEM139Q8IV31 216 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 TMEM35BQ8NCS4 154 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 C1orf131Q8NDD1 294 aaKnown RBP13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 ZNF707Q96C28 371 aaPredicted RBP13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 PABPC5Q96DU9 382 aaKnown RBP13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 HSFY1Q96LI6 401 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 SLC4A5Q9BY07 1137 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 CLEC1BQ9P126 229 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 NENFQ9UMX5 172 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 PLXNA3P51805 1871 aa13.36□□□□□ -0.27
CHMP2A-201ENST00000312547 MYO9BQ13459 2157 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 FAM92AA1XBS5 289 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 SLC38A8A6NNN8 435 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 HMGA1P17096 107 aaKnown RBP13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 HOXB8P17481 243 aaPredicted RBP13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 TNFAIP3P21580 790 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 LTBRP36941 435 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 EIF4A3P38919 411 aaKnown RBP13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 SLC5A3P53794 718 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 EPHB3P54753 998 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 CENPCQ03188 943 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 SYCE2Q6PIF2 218 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 GPRIN1Q7Z2K8 1008 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 TMEM110Q86TL2 294 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 GPR152Q8TDT2 470 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 GIPC2Q8TF65 315 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 PSMG2Q969U7 264 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 MYRFLQ96LU7 910 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 TTLL2Q9BWV7 592 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 PRKD2Q9BZL6 878 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 PDCL3Q9H2J4 239 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 SFXN1Q9H9B4 322 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 CYLDQ9NQC7 956 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 COMMD8Q9NX08 183 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 ADAMTS1Q9UHI8 967 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 ASB3Q9Y575 518 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 CEP83Q9Y592 693 aa13.35□□□□□ -0.27
CHMP2A-201ENST00000312547 USP3Q9Y6I4 520 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms