RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 ARHGEF37A1IGU5 675 aa17.58■□□□□ 0.4
CLCF1-201ENST00000312438 XPO1O14980 1071 aaKnown RBP17.58■□□□□ 0.4
CLCF1-201ENST00000312438 ODC1P11926 461 aa17.58■□□□□ 0.4
CLCF1-201ENST00000312438 PCSK1P29120 753 aa17.58■□□□□ 0.4
CLCF1-201ENST00000312438 PCK1P35558 622 aa17.58■□□□□ 0.4
CLCF1-201ENST00000312438 COILP38432 576 aaPredicted RBP17.58■□□□□ 0.4
CLCF1-201ENST00000312438 PLCB3Q01970 1234 aa17.58■□□□□ 0.4
CLCF1-201ENST00000312438 SLC25A11Q02978 314 aaKnown RBP17.58■□□□□ 0.4
CLCF1-201ENST00000312438 LLGL1Q15334 1064 aa17.58■□□□□ 0.4
CLCF1-201ENST00000312438 KIAA0319Q5VV43 1072 aa17.58■□□□□ 0.4
CLCF1-201ENST00000312438 GSPT2Q8IYD1 628 aaKnown RBP17.58■□□□□ 0.4
CLCF1-201ENST00000312438 SYT15Q9BQS2 421 aa17.58■□□□□ 0.4
CLCF1-201ENST00000312438 RASAL2Q9UJF2 1139 aa17.58■□□□□ 0.4
CLCF1-201ENST00000312438 DSEQ9UL01 958 aa17.58■□□□□ 0.4
CLCF1-201ENST00000312438 NFU1Q9UMS0 254 aa17.58■□□□□ 0.4
CLCF1-201ENST00000312438 TIMM13Q9Y5L4 95 aaPredicted RBP17.58■□□□□ 0.4
CLCF1-201ENST00000312438 PDCD11Q14690 1871 aaKnown RBP17.57■□□□□ 0.4
CLCF1-201ENST00000312438 M0QZQ0 153 aa17.57■□□□□ 0.4
CLCF1-201ENST00000312438 NBNO60934 754 aa17.57■□□□□ 0.4
CLCF1-201ENST00000312438 KRT1P04264 644 aa17.57■□□□□ 0.4
CLCF1-201ENST00000312438 CYP11A1P05108 521 aa17.57■□□□□ 0.4
CLCF1-201ENST00000312438 TKTP29401 623 aaKnown RBP17.57■□□□□ 0.4
CLCF1-201ENST00000312438 TNNT3P45378 269 aaPredicted RBP17.57■□□□□ 0.4
CLCF1-201ENST00000312438 KLF1Q13351 362 aaPredicted RBP17.57■□□□□ 0.4
CLCF1-201ENST00000312438 NOMO2Q5JPE7 1267 aa17.57■□□□□ 0.4
CLCF1-201ENST00000312438 TXNRD3NBQ6F5E7 133 aa17.57■□□□□ 0.4
CLCF1-201ENST00000312438 CD300LGQ6UXG3 332 aa17.57■□□□□ 0.4
CLCF1-201ENST00000312438 PAQR9Q6ZVX9 377 aa17.57■□□□□ 0.4
CLCF1-201ENST00000312438 ARCQ7LC44 396 aa17.57■□□□□ 0.4
CLCF1-201ENST00000312438 CCDC105Q8IYK2 499 aa17.57■□□□□ 0.4
CLCF1-201ENST00000312438 URGCPQ8TCY9 931 aa17.57■□□□□ 0.4
CLCF1-201ENST00000312438 KHSRPQ92945 711 aaKnown RBP eCLIP17.57■□□□□ 0.4
CLCF1-201ENST00000312438 SLITRK1Q96PX8 696 aa17.57■□□□□ 0.4
CLCF1-201ENST00000312438 HEMGNQ9BXL5 484 aa17.57■□□□□ 0.4
CLCF1-201ENST00000312438 ELAC1Q9H777 363 aaKnown RBP17.57■□□□□ 0.4
CLCF1-201ENST00000312438 TMEM161AQ9NX61 479 aa17.57■□□□□ 0.4
CLCF1-201ENST00000312438 WBP1LQ9NX94 342 aa17.57■□□□□ 0.4
CLCF1-201ENST00000312438 FEZ2Q9UHY8 353 aaPredicted RBP17.57■□□□□ 0.4
CLCF1-201ENST00000312438 ENPP3O14638 875 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 TJP3O95049 919 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 NPR3P17342 541 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 DESP17661 470 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 PTPN7P35236 360 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 PTGIRP43119 386 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 DRG2P55039 364 aaKnown RBP17.56■□□□□ 0.4
CLCF1-201ENST00000312438 GPNMBQ14956 572 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 TRADDQ15628 312 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 PLEKHG4Q58EX7 1191 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 MDH1BQ5I0G3 518 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 TTC27Q6P3X3 843 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 JAMLQ86YT9 394 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 DBF4BQ8NFT6 615 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 KCTD13Q8WZ19 329 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 CAVIN3Q969G5 261 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 PIWIL1Q96J94 861 aaKnown RBP17.56■□□□□ 0.4
CLCF1-201ENST00000312438 NCAPGQ9BPX3 1015 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 ACBD6Q9BR61 282 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 ERP44Q9BS26 406 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 MED10Q9BTT4 135 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 B3GNT5Q9BYG0 378 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 VIPAS39Q9H9C1 493 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 CRTAC1Q9NQ79 661 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 FAM114A2Q9NRY5 505 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 PI4K2BG5E9Z4 385 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 DPYSL4O14531 572 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 GRAP2O75791 330 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 LCP1P13796 627 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 MIPP30301 263 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 FLT3P36888 993 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 BRCC3P46736 316 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 NNTQ13423 1086 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 CCDC14Q49A88 953 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 CLLU1OSQ5K130 101 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 MFSD7Q6UXD7 560 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 SPOCD1Q6ZMY3 1216 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 SND1Q7KZF4 910 aaKnown RBP eCLIP17.56■□□□□ 0.4
CLCF1-201ENST00000312438 SLC26A9Q7LBE3 791 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 PIGZQ86VD9 579 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 MYCBPAPQ8TBZ2 947 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 C1orf54Q8WWF1 131 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 RSPH1Q8WYR4 309 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 RAPGEF5Q92565 580 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 SEPT8Q92599 483 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 APBB2Q92870 758 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 HERPUD2Q9BSE4 406 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 ZWILCHQ9H900 591 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 USP18Q9UMW8 372 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 EFR3BQ9Y2G0 817 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 CENPFP49454 3210 aa17.56■□□□□ 0.4
CLCF1-201ENST00000312438 LRRD1A4D1F6 860 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 CLDN5O00501 218 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 PQBP1O60828 265 aaKnown RBP17.55■□□□□ 0.4
CLCF1-201ENST00000312438 TRUB2O95900 331 aaKnown RBP17.55■□□□□ 0.4
CLCF1-201ENST00000312438 FAM200BP0CF97 657 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 IL1R2P27930 398 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 SDC4P31431 198 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 DSC1Q08554 894 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 TAF5Q15542 800 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 CCNG2Q16589 344 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 PAN2Q504Q3 1202 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms