RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 LRRC8DQ7L1W4 858 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 TMEM161AQ9NX61 479 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 ERCC6L2Q5T890 1561 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 SAC3D1A6NKF1 404 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 BNIP3LO60238 219 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 ENTPD3O75355 529 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 SGPL1O95470 568 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 SEC23AQ15436 765 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 IER5Q5VY09 327 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 DENND1BQ6P3S1 775 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 CCDC103Q8IW40 242 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 THAP1Q9NVV9 213 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 ITGB1BP2Q9UKP3 347 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 PREPLQ4J6C6 727 aaPredicted RBP13.64□□□□□ -0.23
SNED1-201ENST00000310397 ATF7IP2Q5U623 682 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 IRGCQ6NXR0 463 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 TRAF7Q6Q0C0 670 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 KYQ8NBH2 561 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 TUBGCP4Q9UGJ1 667 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 PCDHB8Q9UN66 801 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 SUPT3HB4E1H0 165 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 GRAP2O75791 330 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 AKAP3O75969 853 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 PROSCO94903 275 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 HIST1H2AGP0C0S8 130 aaPredicted RBP13.64□□□□□ -0.23
SNED1-201ENST00000310397 HIST1H2ADP20671 130 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 ITGB3BPQ13352 177 aaPredicted RBP13.64□□□□□ -0.23
SNED1-201ENST00000310397 SLC10A4Q96EP9 437 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 HIST1H2AHQ96KK5 128 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 HIST1H2AJQ99878 128 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 H2AFJQ9BTM1 129 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 RUSC1Q9BVN2 902 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 MAP3K20Q9NYL2 800 aaKnown RBP13.64□□□□□ -0.23
SNED1-201ENST00000310397 NCKIPSDQ9NZQ3 722 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 FARP1Q9Y4F1 1045 aaPredicted RBP13.64□□□□□ -0.23
SNED1-201ENST00000310397 DIP2BQ9P265 1576 aa13.64□□□□□ -0.23
SNED1-201ENST00000310397 ASB14A6NK59 587 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 MSH4O15457 936 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 SH2D3AQ9BRG2 576 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 UBE2OQ9C0C9 1292 aaKnown RBP13.63□□□□□ -0.23
SNED1-201ENST00000310397 USP18Q9UMW8 372 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 FAM9CQ8IZT9 166 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 ZKSCAN4Q969J2 545 aaPredicted RBP13.63□□□□□ -0.23
SNED1-201ENST00000310397 BRD8Q9H0E9 1235 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 IMPAD1Q9NX62 359 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 COL3A1P02461 1466 aaPredicted RBP13.63□□□□□ -0.23
SNED1-201ENST00000310397 FAM58BPP0C7Q3 252 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 PRKAA2P54646 552 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 C1QBPQ07021 282 aaKnown RBP13.63□□□□□ -0.23
SNED1-201ENST00000310397 MTM1Q13496 603 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 ARHGAP22Q7Z5H3 698 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 RNPEPL1Q9HAU8 725 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 CITO14578 2027 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 MYO1GB0I1T2 1018 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 POLRMTO00411 1230 aaKnown RBP13.63□□□□□ -0.23
SNED1-201ENST00000310397 FKBP9O95302 570 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 FAM153BP0C7A2 387 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 MTFR1Q15390 333 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 FAM153CQ494X1 144 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 FKBP9P1Q75LS8 142 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 ZNF720Q7Z2F6 126 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 NT5DC3Q86UY8 548 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 NR1H4Q96RI1 486 aaPredicted RBP13.63□□□□□ -0.23
SNED1-201ENST00000310397 SH3GL1Q99961 368 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 PDE4DIPQ5VU43 2346 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 C5orf58C9J3I9 102 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 RASSF9O75901 435 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 ALDH5A1P51649 535 aaPredicted RBP13.63□□□□□ -0.23
SNED1-201ENST00000310397 PLA2G4FQ68DD2 849 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 UGT3A1Q6NUS8 523 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 SLC47A2Q86VL8 602 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 CCDC60Q8IWA6 550 aaPredicted RBP13.63□□□□□ -0.23
SNED1-201ENST00000310397 LRRC40Q9H9A6 602 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 AAR2Q9Y312 384 aaKnown RBP13.63□□□□□ -0.23
SNED1-201ENST00000310397 CCDC153Q494R4 210 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 CYP4A22Q5TCH4 519 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 PCNX4Q63HM2 1172 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 NOP9Q86U38 636 aaKnown RBP13.63□□□□□ -0.23
SNED1-201ENST00000310397 CROCCP3Q8IVE0 287 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 ZNF263O14978 683 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 TOMM70O94826 608 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 CHRNB3Q05901 458 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 RBM46Q8TBY0 533 aaKnown RBP13.63□□□□□ -0.23
SNED1-201ENST00000310397 NMD3Q96D46 503 aaKnown RBP13.63□□□□□ -0.23
SNED1-201ENST00000310397 STARD13Q9Y3M8 1113 aa13.63□□□□□ -0.23
SNED1-201ENST00000310397 MAPTP10636 758 aaKnown RBP13.62□□□□□ -0.23
SNED1-201ENST00000310397 PCSK1P29120 753 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 OTUD4Q01804 1114 aaKnown RBP13.62□□□□□ -0.23
SNED1-201ENST00000310397 ELMSAN1Q6PJG2 1045 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 HDAC7Q8WUI4 952 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 DCUN1D1Q96GG9 259 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 FOPNLQ96NB1 174 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 SLC38A7Q9NVC3 462 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 WDR70Q9NW82 654 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 SOAT2O75908 522 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 MOCS2O96007 188 aaPredicted RBP13.62□□□□□ -0.23
SNED1-201ENST00000310397 CASP4P49662 377 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 ERVK-9P63128 1117 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 SV2CQ496J9 727 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 TBC1D16Q8TBP0 767 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms