RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 MAGEF1Q9HAY2 307 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 MED4Q9NPJ6 270 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 SH3GLB2Q9NR46 395 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 SAMSN1Q9NSI8 373 aaKnown RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 L1RE1Q9UN81 338 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 PMF1-BGLAPU3KQ54 211 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 MYH9P35579 1960 aaKnown RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 CACNA1AO00555 2505 aa5.34□□□□□ -1.56
CKS1B-201ENST00000308987 ABHD14A-ACY1A0A1B0GW23 586 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 ANO9A1A5B4 782 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 TARSL2A2RTX5 802 aaKnown RBP5.33□□□□□ -1.56
CKS1B-201ENST00000308987 CTAGE15A4D2H0 777 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 SH3D21A4FU49 640 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 LAD1O00515 517 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 RGS13O14921 159 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 TEX33O43247 280 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 CLEC3AO75596 197 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 CLSTN1O94985 981 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 GH1P01241 217 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 GYPCP04921 128 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 IVLP07476 585 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 CTAGE8P0CG41 777 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 ATF2P15336 505 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 RXRAP19793 462 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 EEF1GP26641 437 aaKnown RBP5.33□□□□□ -1.56
CKS1B-201ENST00000308987 HOXC8P31273 242 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 CASP14P31944 242 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 COPB1P53618 953 aaKnown RBP5.33□□□□□ -1.56
CKS1B-201ENST00000308987 HNRNPH2P55795 449 aaKnown RBP5.33□□□□□ -1.56
CKS1B-201ENST00000308987 KRT83P78385 493 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 NHLH1Q02575 133 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 GRIN1Q05586 938 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 TROAPQ12815 778 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 ORC2Q13416 577 aaPredicted RBP5.33□□□□□ -1.56
CKS1B-201ENST00000308987 PWP1Q13610 501 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 KCNB1Q14721 858 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 CDC37Q16543 378 aaPredicted RBP5.33□□□□□ -1.56
CKS1B-201ENST00000308987 KIAA0753Q2KHM9 967 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 QRICH1Q2TAL8 776 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 HSDL1Q3SXM5 330 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 MAP9Q49MG5 647 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 EPC2Q52LR7 807 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 COBLL1Q53SF7 1204 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 PLEKHG4Q58EX7 1191 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 TCEAL5Q5H9L2 206 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 TTC38Q5R3I4 469 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 ZNF658Q5TYW1 1059 aaPredicted RBP5.33□□□□□ -1.56
CKS1B-201ENST00000308987 GALNT17Q6IS24 598 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 RAD9BQ6WBX8 426 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 TMTC3Q6ZXV5 915 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 REC114Q7Z4M0 266 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 CTAGE6Q86UF2 777 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 SERINC5Q86VE9 423 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 IQCA1Q86XH1 822 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 CTAGE4Q8IX94 777 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 ADGRF4Q8IZF3 695 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 Q8N1X5 172 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 OR8K1Q8NGG5 319 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 CTCFLQ8NI51 663 aaPredicted RBP5.33□□□□□ -1.56
CKS1B-201ENST00000308987 FAM71BQ8TC56 605 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 MRPL38Q96DV4 380 aaKnown RBP5.33□□□□□ -1.56
CKS1B-201ENST00000308987 RMDN3Q96TC7 470 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 C16orf70Q9BSU1 422 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 NUP58Q9BVL2 599 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 SLITRK6Q9H5Y7 841 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 MRPL44Q9H9J2 332 aaKnown RBP5.33□□□□□ -1.56
CKS1B-201ENST00000308987 JMJD4Q9H9V9 463 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 ALG13Q9NP73 1137 aaKnown RBP5.33□□□□□ -1.56
CKS1B-201ENST00000308987 PXMP2Q9NR77 195 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 CHST7Q9NS84 486 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 ABHD10Q9NUJ1 306 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 ADAM21Q9UKJ8 722 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 KCNJ14Q9UNX9 436 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 PCDHB14Q9Y5E9 798 aa5.33□□□□□ -1.56
CKS1B-201ENST00000308987 CEP250Q9BV73 2442 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 DOCK6Q96HP0 2047 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 SPTBN2O15020 2390 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 A6NNZ2 444 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 H3BNC9 293 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 SEC31AO94979 1220 aaKnown RBP5.32□□□□□ -1.56
CKS1B-201ENST00000308987 TACR2P21452 398 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 KIF5BP33176 963 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 ACTN2P35609 894 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 PRPHP41219 470 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 ARHGAP25P42331 645 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 AARSP49588 968 aaKnown RBP eCLIP5.32□□□□□ -1.56
CKS1B-201ENST00000308987 HSD17B4P51659 736 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 DAB2P98082 770 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 CDK17Q00537 523 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 AMPD2Q01433 879 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 GHRHRQ02643 423 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 ITIH3Q06033 890 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 CKAP4Q07065 602 aaKnown RBP5.32□□□□□ -1.56
CKS1B-201ENST00000308987 GOLGA8FQ08AF8 430 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 GOLGA8DPQ0D2H9 430 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 PAK1Q13153 545 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 STIM1Q13586 685 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 CAMK1Q14012 370 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 KARSQ15046 597 aaKnown RBP5.32□□□□□ -1.56
CKS1B-201ENST00000308987 KRT31Q15323 416 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms