RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 MAMLD1Q13495 774 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 TBCCQ15814 346 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 NFIL3Q16649 462 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 MTERF2Q49AM1 385 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 FSCBQ5H9T9 825 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.58□□□□□ -0.24
TRIM35-201ENST00000305364 SLC26A11Q86WA9 606 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 LENG1Q96BZ8 264 aaPredicted RBP13.58□□□□□ -0.24
TRIM35-201ENST00000305364 CATSPER2Q96P56 530 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 HERPUD2Q9BSE4 406 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 COA1Q9GZY4 146 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 KCNH7Q9NS40 1196 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 PACSIN3Q9UKS6 424 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 GRID1Q9ULK0 1009 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 TCP10L2B9ZVM9 353 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 F8W8V4 182 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 PSMD10O75832 226 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 KRT3P12035 628 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 RXRBP28702 533 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 GTF2H1P32780 548 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 CIITAP33076 1130 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 PSMC1P62191 440 aaKnown RBP13.58□□□□□ -0.24
TRIM35-201ENST00000305364 PIGHQ14442 188 aaPredicted RBP13.58□□□□□ -0.24
TRIM35-201ENST00000305364 SHROOM1Q2M3G4 852 aaPredicted RBP13.58□□□□□ -0.24
TRIM35-201ENST00000305364 ANKRD20A4Q4UJ75 823 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 DENND1AQ8TEH3 1009 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 SLITRK1Q96PX8 696 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 PRPF18Q99633 342 aaKnown RBP13.58□□□□□ -0.24
TRIM35-201ENST00000305364 MSTO1Q9BUK6 570 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 MRPL1Q9BYD6 325 aaKnown RBP13.58□□□□□ -0.24
TRIM35-201ENST00000305364 TMCO1Q9UM00 188 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 OSBPP22059 807 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 CDH6P55285 790 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 TFAMQ00059 246 aaKnown RBP13.58□□□□□ -0.24
TRIM35-201ENST00000305364 KRT72Q14CN4 511 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 WDR72Q3MJ13 1102 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 PLEKHG4Q58EX7 1191 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 ZNF772Q68DY9 489 aaPredicted RBP13.58□□□□□ -0.24
TRIM35-201ENST00000305364 PAF1Q8N7H5 531 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 RBAKQ9NYW8 714 aaPredicted RBP13.58□□□□□ -0.24
TRIM35-201ENST00000305364 PPM1HQ9ULR3 514 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 KAT6AQ92794 2004 aa13.58□□□□□ -0.24
TRIM35-201ENST00000305364 FER1L4A9Z1Z3 1794 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 SMIM31A0A1B0GVY4 71 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 KCNN4O15554 427 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 MAGEC1O60732 1142 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 SLC44A4Q53GD3 710 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 EFHC2Q5JST6 749 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 B3GNT6Q6ZMB0 384 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 DENND5BQ6ZUT9 1274 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 ANKLE1Q8NAG6 615 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 SLC7A8Q9UHI5 535 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 STRNO43815 780 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 PMLP29590 882 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 RARRES1P49788 294 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 SOX10P56693 466 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 ARHGEF16Q5VV41 709 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 ABRAQ8N0Z2 381 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 SYT11Q9BT88 431 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 EPS15L1Q9UBC2 864 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 AGO2Q9UKV8 859 aaKnown RBP13.57□□□□□ -0.24
TRIM35-201ENST00000305364 PHRF1Q9P1Y6 1649 aaKnown RBP13.57□□□□□ -0.24
TRIM35-201ENST00000305364 PARP4Q9UKK3 1724 aaKnown RBP13.57□□□□□ -0.24
TRIM35-201ENST00000305364 K7ERI5 159 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 UQCRBP14927 111 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 TCN1P20061 433 aaPredicted RBP13.57□□□□□ -0.24
TRIM35-201ENST00000305364 TBXAS1P24557 533 aaPredicted RBP13.57□□□□□ -0.24
TRIM35-201ENST00000305364 GPC3P51654 580 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 TMEM259Q4ZIN3 620 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 CMPK2Q5EBM0 449 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 CCT7Q99832 543 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 XAB2Q9HCS7 855 aaKnown RBP13.57□□□□□ -0.24
TRIM35-201ENST00000305364 RABGEF1Q9UJ41 708 aa13.57□□□□□ -0.24
TRIM35-201ENST00000305364 TMEM191BP0C7N4 346 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 VCLP18206 1134 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 NPTX2P47972 431 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 RPL10AP62906 217 aaKnown RBP13.56□□□□□ -0.24
TRIM35-201ENST00000305364 CYP24A1Q07973 514 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 CUL2Q13617 745 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 PPP6R3Q5H9R7 873 aaPredicted RBP13.56□□□□□ -0.24
TRIM35-201ENST00000305364 ACAD11Q709F0 780 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 ZBTB33Q86T24 672 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 LMO3Q8TAP4 145 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 HELQQ8TDG4 1101 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 LENG9Q96B70 501 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 RIT2Q99578 217 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 PICK1Q9NRD5 415 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 BTBD7Q9P203 1132 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 MAGED2Q9UNF1 606 aaPredicted RBP13.56□□□□□ -0.24
TRIM35-201ENST00000305364 USP54Q70EL1 1684 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 NEMP1O14524 444 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 TYROBPO43914 113 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 SUPT3HO75486 399 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 DGKIO75912 1065 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 ENO3P13929 434 aaPredicted RBP13.56□□□□□ -0.24
TRIM35-201ENST00000305364 GCNT1Q02742 428 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 PPIDQ08752 370 aaKnown RBP13.56□□□□□ -0.24
TRIM35-201ENST00000305364 TBL3Q12788 808 aaKnown RBP13.56□□□□□ -0.24
TRIM35-201ENST00000305364 RAPH1Q70E73 1250 aa13.56□□□□□ -0.24
TRIM35-201ENST00000305364 LDHDQ86WU2 507 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms