RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 CEP83Q9Y592 693 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 LSM8O95777 96 aaKnown RBP28.68■■■□□ 2.18
HDAC3-201ENST00000305264 ATF6P18850 670 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 CLEC16AQ2KHT3 1053 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 TRIM72Q6ZMU5 477 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 VPS36Q86VN1 386 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 VN1R2Q8NFZ6 395 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 CPA5Q8WXQ8 436 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 PPP2R3CQ969Q6 453 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 CCDC42Q96M95 316 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 TAS2R14Q9NYV8 317 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 INSL5Q9Y5Q6 135 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 EYSQ5T1H1 3165 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 XPO1O14980 1071 aaKnown RBP28.67■■■□□ 2.18
HDAC3-201ENST00000305264 UNGP13051 313 aaPredicted RBP28.67■■■□□ 2.18
HDAC3-201ENST00000305264 IGFBP4P22692 258 aa28.67■■■□□ 2.18
HDAC3-201ENST00000305264 KIF11P52732 1056 aa28.67■■■□□ 2.18
HDAC3-201ENST00000305264 GFPT1Q06210 699 aaPredicted RBP28.67■■■□□ 2.18
HDAC3-201ENST00000305264 HYAL1Q12794 435 aa28.67■■■□□ 2.18
HDAC3-201ENST00000305264 MTF1Q14872 753 aa28.67■■■□□ 2.18
HDAC3-201ENST00000305264 GPR153Q6NV75 609 aa28.67■■■□□ 2.18
HDAC3-201ENST00000305264 PMF1Q6P1K2 205 aa28.67■■■□□ 2.18
HDAC3-201ENST00000305264 PIGZQ86VD9 579 aa28.67■■■□□ 2.18
HDAC3-201ENST00000305264 TMTC1Q8IUR5 882 aa28.67■■■□□ 2.18
HDAC3-201ENST00000305264 TMEM35BQ8NCS4 154 aa28.67■■■□□ 2.18
HDAC3-201ENST00000305264 GPR152Q8TDT2 470 aa28.67■■■□□ 2.18
HDAC3-201ENST00000305264 IGFLR1Q9H665 355 aa28.67■■■□□ 2.18
HDAC3-201ENST00000305264 TRIM66O15016 1216 aa28.66■■■□□ 2.18
HDAC3-201ENST00000305264 C8AP07357 584 aa28.66■■■□□ 2.18
HDAC3-201ENST00000305264 PLA2G4AP47712 749 aa28.66■■■□□ 2.18
HDAC3-201ENST00000305264 TUFMP49411 452 aaKnown RBP28.66■■■□□ 2.18
HDAC3-201ENST00000305264 RGS7P49802 495 aa28.66■■■□□ 2.18
HDAC3-201ENST00000305264 SLC8A3P57103 927 aa28.66■■■□□ 2.18
HDAC3-201ENST00000305264 PDCLQ13371 301 aa28.66■■■□□ 2.18
HDAC3-201ENST00000305264 GPRIN1Q7Z2K8 1008 aa28.66■■■□□ 2.18
HDAC3-201ENST00000305264 CDCA3Q99618 268 aaPredicted RBP28.66■■■□□ 2.18
HDAC3-201ENST00000305264 SPTLC3Q9NUV7 552 aa28.66■■■□□ 2.18
HDAC3-201ENST00000305264 HHLA1C9JL84 531 aa28.66■■■□□ 2.18
HDAC3-201ENST00000305264 AKR1B10O60218 316 aa28.66■■■□□ 2.18
HDAC3-201ENST00000305264 C1RP00736 705 aa28.66■■■□□ 2.18
HDAC3-201ENST00000305264 POU3F3P20264 500 aaPredicted RBP28.66■■■□□ 2.18
HDAC3-201ENST00000305264 LIN9Q5TKA1 542 aa28.66■■■□□ 2.18
HDAC3-201ENST00000305264 RAD9BQ6WBX8 426 aa28.66■■■□□ 2.18
HDAC3-201ENST00000305264 DNAAF5Q86Y56 855 aa28.66■■■□□ 2.18
HDAC3-201ENST00000305264 C8orf48Q96LL4 319 aa28.66■■■□□ 2.18
HDAC3-201ENST00000305264 GREB1Q4ZG55 1949 aa28.66■■■□□ 2.18
HDAC3-201ENST00000305264 TMCO5BA8MYB1 307 aa28.65■■■□□ 2.18
HDAC3-201ENST00000305264 ANXA13P27216 316 aa28.65■■■□□ 2.18
HDAC3-201ENST00000305264 CCZ1BP86790 482 aa28.65■■■□□ 2.18
HDAC3-201ENST00000305264 CCZ1P86791 482 aaPredicted RBP28.65■■■□□ 2.18
HDAC3-201ENST00000305264 KCNC3Q14003 757 aa28.65■■■□□ 2.18
HDAC3-201ENST00000305264 GAS2L1Q99501 681 aaPredicted RBP28.65■■■□□ 2.18
HDAC3-201ENST00000305264 CENPCQ03188 943 aa28.64■■■□□ 2.18
HDAC3-201ENST00000305264 TWF1Q12792 350 aa28.64■■■□□ 2.18
HDAC3-201ENST00000305264 SLC18A3Q16572 532 aa28.64■■■□□ 2.18
HDAC3-201ENST00000305264 CCDC149Q6ZUS6 474 aa28.64■■■□□ 2.18
HDAC3-201ENST00000305264 CPXM1Q96SM3 734 aa28.64■■■□□ 2.18
HDAC3-201ENST00000305264 TJP2Q9UDY2 1190 aa28.64■■■□□ 2.18
HDAC3-201ENST00000305264 NENFQ9UMX5 172 aa28.64■■■□□ 2.18
HDAC3-201ENST00000305264 GABBR2O75899 941 aa28.64■■■□□ 2.17
HDAC3-201ENST00000305264 RPL10AP62906 217 aaKnown RBP28.64■■■□□ 2.17
HDAC3-201ENST00000305264 PTPN20Q4JDL3 420 aa28.64■■■□□ 2.17
HDAC3-201ENST00000305264 CCDC112Q8NEF3 446 aa28.64■■■□□ 2.17
HDAC3-201ENST00000305264 GIPC2Q8TF65 315 aa28.64■■■□□ 2.17
HDAC3-201ENST00000305264 KCNF1Q9H3M0 494 aa28.64■■■□□ 2.17
HDAC3-201ENST00000305264 PLEKHA4Q9H4M7 779 aa28.64■■■□□ 2.17
HDAC3-201ENST00000305264 ST7Q9NRC1 585 aa28.64■■■□□ 2.17
HDAC3-201ENST00000305264 NAGPAQ9UK23 515 aa28.64■■■□□ 2.17
HDAC3-201ENST00000305264 PIK3R2O00459 728 aa28.63■■■□□ 2.17
HDAC3-201ENST00000305264 PNPLA8Q9NP80 782 aa28.63■■■□□ 2.17
HDAC3-201ENST00000305264 LINC01565O15544 149 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 RFPL2O75678 378 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 GLP2RO95838 553 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 ALDH1A3P47895 512 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 C2CD6Q53TS8 623 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 CCDC170Q8IYT3 715 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 MYLIPQ8WY64 445 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 ZNF830Q96NB3 372 aaPredicted RBP28.62■■■□□ 2.17
HDAC3-201ENST00000305264 TNFRSF10BO14763 440 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 ZNF263O14978 683 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 NSFP46459 744 aaKnown RBP28.62■■■□□ 2.17
HDAC3-201ENST00000305264 SLC5A3P53794 718 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 MICALL1Q8N3F8 863 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 DEFB123Q8N688 67 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 STK32AQ8WU08 396 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 PPP1R13BQ96KQ4 1090 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 SPATA17Q96L03 361 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 GUCD1Q96NT3 240 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 NOX5Q96PH1 765 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 CDX2Q99626 313 aaPredicted RBP28.62■■■□□ 2.17
HDAC3-201ENST00000305264 SLC4A5Q9BY07 1137 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 MYO16Q9Y6X6 1858 aa28.62■■■□□ 2.17
HDAC3-201ENST00000305264 ZNF638Q14966 1978 aaKnown RBP28.61■■■□□ 2.17
HDAC3-201ENST00000305264 GZMAP12544 262 aa28.61■■■□□ 2.17
HDAC3-201ENST00000305264 MTMR3Q13615 1198 aa28.61■■■□□ 2.17
HDAC3-201ENST00000305264 ALKBH5Q6P6C2 394 aaKnown RBP28.61■■■□□ 2.17
HDAC3-201ENST00000305264 EFHBQ8N7U6 833 aa28.61■■■□□ 2.17
HDAC3-201ENST00000305264 SCAMP5Q8TAC9 235 aa28.61■■■□□ 2.17
HDAC3-201ENST00000305264 KCTD13Q8WZ19 329 aa28.61■■■□□ 2.17
HDAC3-201ENST00000305264 UBXN6Q9BZV1 441 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms