RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 NR1H4Q96RI1 486 aaPredicted RBP15.31■□□□□ 0.04
COL6A2-201ENST00000300527 MXRA8Q9BRK3 442 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 WDR83Q9BRX9 315 aaKnown RBP15.31■□□□□ 0.04
COL6A2-201ENST00000300527 C10orf71Q711Q0 1435 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.31■□□□□ 0.04
COL6A2-201ENST00000300527 TCRBV9S1A1TA0A576 114 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 UGT1A9O60656 530 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 LYPLA1O75608 230 aaPredicted RBP15.31■□□□□ 0.04
COL6A2-201ENST00000300527 CD48P09326 243 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 NCF2P19878 526 aaPredicted RBP15.31■□□□□ 0.04
COL6A2-201ENST00000300527 PSMA2P25787 234 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 GTF2H1P32780 548 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 WNT7BP56706 349 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 BPIFB4P59827 614 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 PDE1BQ01064 536 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 SPP2Q13103 211 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 TRIM74Q86UV6 250 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 TRIM73Q86UV7 250 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 CCDC33Q8N5R6 958 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 GDPD5Q8WTR4 605 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 UGT1A7Q9HAW7 530 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 UGT1A10Q9HAW8 530 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 UGT1A8Q9HAW9 530 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 FAM198AQ9UFP1 575 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 hCG_1818297A0A087WSY0 165 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 TCP10L2B9ZVM9 353 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 CD19P15391 556 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 VAV1P15498 845 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 GSTA3Q16772 222 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 AOC3Q16853 763 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 LDHDQ86WU2 507 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 ABRAQ8N0Z2 381 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 GPD1LQ8N335 351 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 AGR3Q8TD06 166 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 WWP1Q9H0M0 922 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 MRPL11Q9Y3B7 192 aaKnown RBP15.31■□□□□ 0.04
COL6A2-201ENST00000300527 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.3■□□□□ 0.04
COL6A2-201ENST00000300527 PPEF1O14829 653 aaPredicted RBP15.3■□□□□ 0.04
COL6A2-201ENST00000300527 TM7SF2O76062 418 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 HSPA1LP34931 641 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 POLNQ7Z5Q5 900 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 TMEM161BQ8NDZ6 487 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 NAT14Q8WUY8 206 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 ALKBH8Q96BT7 664 aaKnown RBP15.3■□□□□ 0.04
COL6A2-201ENST00000300527 CCPG1Q9ULG6 757 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 KIF13BQ9NQT8 1826 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 PIK3R2O00459 728 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 FAM200BP0CF97 657 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 SLC18A1P54219 525 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 EIF3EP60228 445 aaKnown RBP15.3■□□□□ 0.04
COL6A2-201ENST00000300527 C16orf46Q6P387 395 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 SLC39A4Q6P5W5 647 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 DARS2Q6PI48 645 aaKnown RBP15.3■□□□□ 0.04
COL6A2-201ENST00000300527 NPNTQ6UXI9 565 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 NME8Q8N427 588 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 OLFM3Q96PB7 478 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 COA1Q9GZY4 146 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 IFT122Q9HBG6 1241 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 CLRN2A0PK11 232 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 H7C0C1 242 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 NFIBO00712 420 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 PROCP04070 461 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 ATP5OP48047 213 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 ORC1Q13415 861 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 KRT72Q14CN4 511 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 NET1Q7Z628 596 aaPredicted RBP15.3■□□□□ 0.04
COL6A2-201ENST00000300527 ITFG2Q969R8 447 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 FAF2Q96CS3 445 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 ZBTB45Q96K62 511 aaPredicted RBP15.3■□□□□ 0.04
COL6A2-201ENST00000300527 TMEM165Q9HC07 324 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 SLC9A2Q9UBY0 812 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 APPL1Q9UKG1 709 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 AK5Q9Y6K8 562 aa15.3■□□□□ 0.04
COL6A2-201ENST00000300527 BBOX1O75936 387 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 GRIA2P42262 883 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 ACTR3P61158 418 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 MTMR1Q13613 665 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 OASLQ15646 514 aaKnown RBP15.29■□□□□ 0.04
COL6A2-201ENST00000300527 TDRD10Q5VZ19 366 aaKnown RBP15.29■□□□□ 0.04
COL6A2-201ENST00000300527 IYDQ6PHW0 289 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 C1orf228Q6PIY5 440 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 GMCL1Q96IK5 515 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 PPP1R36Q96LQ0 422 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 MMADHCQ9H3L0 296 aaPredicted RBP15.29■□□□□ 0.04
COL6A2-201ENST00000300527 VIL1P09327 827 aaKnown RBP15.29■□□□□ 0.04
COL6A2-201ENST00000300527 RBP3P10745 1247 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 MSX2P35548 267 aaPredicted RBP15.29■□□□□ 0.04
COL6A2-201ENST00000300527 NLRP11P59045 1033 aaKnown RBP15.29■□□□□ 0.04
COL6A2-201ENST00000300527 GCNT1Q02742 428 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 EFHC1Q5JVL4 640 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 C15orf52Q6ZUT6 534 aaKnown RBP15.29■□□□□ 0.04
COL6A2-201ENST00000300527 NDUFAF2Q8N183 169 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.29■□□□□ 0.04
COL6A2-201ENST00000300527 APOBEC3GQ9HC16 384 aaKnown RBP15.29■□□□□ 0.04
COL6A2-201ENST00000300527 ATXN10Q9UBB4 475 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 SCAF8Q9UPN6 1271 aaKnown RBP15.29■□□□□ 0.04
COL6A2-201ENST00000300527 ZNF862O60290 1169 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 INHBCP55103 352 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 COG7P83436 770 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 CUL2Q13617 745 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms