RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 ACTL9Q8TC94 416 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 PHF12Q96QT6 1004 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 CCDC106Q9BWC9 280 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 CNTN3Q9P232 1028 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 PRR12Q9ULL5 1215 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 SOX13Q9UN79 622 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 PCDHB4Q9Y5E5 795 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 ZHX2Q9Y6X8 837 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 SMCHD1A6NHR9 2005 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 hCG_1818297A0A087WSY0 165 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 C15orf38-AP3S2A0A0A6YYH1 394 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 POLR2MP0CAP2 368 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 SH3BGRP55822 239 aaPredicted RBP13.59□□□□□ -0.23
TVP23A-201ENST00000299866 GTF2BQ00403 316 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 OTUD4Q01804 1114 aaKnown RBP13.59□□□□□ -0.23
TVP23A-201ENST00000299866 DBN1Q16643 649 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 SMTNL2Q2TAL5 461 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 BRDTQ58F21 947 aaPredicted RBP13.59□□□□□ -0.23
TVP23A-201ENST00000299866 DENND5BQ6ZUT9 1274 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 ARPINQ7Z6K5 226 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 CRLF3Q8IUI8 442 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 NUDCD3Q8IVD9 361 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 CERS5Q8N5B7 392 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 MIPOL1Q8TD10 442 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 CFAP36Q96G28 342 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 MCEEQ96PE7 176 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 TCRBV9S1A1TA0A576 114 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 KBTBD13C9JR72 458 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 PMM2O15305 246 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 SETSIPP0DME0 302 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 RGS2P41220 211 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 RARRES1P49788 294 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 NOMO3P69849 1222 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 HPCAP84074 193 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 FOLH1Q04609 750 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 TFDP3Q5H9I0 405 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 TCHHL1Q5QJ38 904 aaPredicted RBP13.59□□□□□ -0.23
TVP23A-201ENST00000299866 DRICH1Q6PGQ1 229 aaPredicted RBP13.59□□□□□ -0.23
TVP23A-201ENST00000299866 DCUN1D2Q6PH85 259 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 C15orf52Q6ZUT6 534 aaKnown RBP13.59□□□□□ -0.23
TVP23A-201ENST00000299866 PCGF5Q86SE9 256 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 NAT8LQ8N9F0 302 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 FAM213AQ9BRX8 229 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 APOL6Q9BWW8 343 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 IP6K2Q9UHH9 426 aa13.59□□□□□ -0.23
TVP23A-201ENST00000299866 CAPN8A6NHC0 703 aa13.58□□□□□ -0.23
TVP23A-201ENST00000299866 ITGAVP06756 1048 aa13.58□□□□□ -0.23
TVP23A-201ENST00000299866 GNA15P30679 374 aa13.58□□□□□ -0.23
TVP23A-201ENST00000299866 GALK1P51570 392 aa13.58□□□□□ -0.23
TVP23A-201ENST00000299866 BMPR2Q13873 1038 aa13.58□□□□□ -0.23
TVP23A-201ENST00000299866 WDR44Q5JSH3 913 aa13.58□□□□□ -0.23
TVP23A-201ENST00000299866 FAM91A1Q658Y4 838 aa13.58□□□□□ -0.23
TVP23A-201ENST00000299866 ATG16L1Q676U5 607 aa13.58□□□□□ -0.23
TVP23A-201ENST00000299866 ICA1LQ8NDH6 482 aa13.58□□□□□ -0.23
TVP23A-201ENST00000299866 GRIP2Q9C0E4 1043 aa13.58□□□□□ -0.23
TVP23A-201ENST00000299866 MYOCOSA0A1B0GUC4 107 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 VILLO15195 856 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 AVILO75366 819 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 WEE2P0C1S8 567 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 RAG1P15918 1043 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 GCNT1Q02742 428 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 SLC18A2Q05940 514 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 PEX6Q13608 980 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 CCNIQ14094 377 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 ANKRD20A4Q4UJ75 823 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 PLEKHA7Q6IQ23 1121 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 AAGABQ6PD74 315 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 B3GNT6Q6ZMB0 384 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 PTF1AQ7RTS3 328 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 C20orf27Q9GZN8 174 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 PARVAQ9NVD7 372 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 ZDHHC7Q9NXF8 308 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 FETUBQ9UGM5 382 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 SERPINA10Q9UK55 444 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 TBX20Q9UMR3 447 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 POLIQ9UNA4 740 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 PCDHAC2Q9Y5I4 1007 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 SCINQ9Y6U3 715 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 ZNFX1Q9P2E3 1918 aaKnown RBP13.58□□□□□ -0.24
TVP23A-201ENST00000299866 A0A0J9YVX5 310 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 DDTLA6NHG4 134 aaPredicted RBP13.58□□□□□ -0.24
TVP23A-201ENST00000299866 CLPTM1O96005 669 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 PROCP04070 461 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 HNRNPCP07910 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
TVP23A-201ENST00000299866 SOX10P56693 466 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 KCNT1Q5JUK3 1230 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 KLHDC10Q6PID8 442 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 FAM71DQ8N9W8 422 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 PPP1R14CQ8TAE6 165 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 ARHGEF1Q92888 912 aaKnown RBP13.58□□□□□ -0.24
TVP23A-201ENST00000299866 NKD2Q969F2 451 aaPredicted RBP13.58□□□□□ -0.24
TVP23A-201ENST00000299866 CLMNQ96JQ2 1002 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 PTTG2Q9NZH5 202 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 PACSIN3Q9UKS6 424 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 ZNRF3Q9ULT6 936 aa13.58□□□□□ -0.24
TVP23A-201ENST00000299866 LOC100653049A0A140TA62 436 aa13.57□□□□□ -0.24
TVP23A-201ENST00000299866 CST8O60676 142 aa13.57□□□□□ -0.24
TVP23A-201ENST00000299866 KRT34O76011 436 aa13.57□□□□□ -0.24
TVP23A-201ENST00000299866 TNNI1P19237 187 aa13.57□□□□□ -0.24
TVP23A-201ENST00000299866 CYP24A1Q07973 514 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms