RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 TAP1Q03518 808 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 DNAJC24Q6P3W2 148 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 RSPO2Q6UXX9 243 aaPredicted RBP25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 TMEM169Q96HH4 297 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 KCNK16Q96T55 309 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 MTIF3Q9H2K0 278 aaKnown RBP25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 ANAPC7Q9UJX3 599 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 PAPSS1O43252 624 aaPredicted RBP25.95■■□□□ 1.74
GTF2A1-201ENST00000298173 MAP3K7CLP57077 242 aa25.95■■□□□ 1.74
GTF2A1-201ENST00000298173 C4orf50Q6ZRC1 276 aa25.95■■□□□ 1.74
GTF2A1-201ENST00000298173 DDX53Q86TM3 631 aaKnown RBP25.95■■□□□ 1.74
GTF2A1-201ENST00000298173 ZDHHC17Q8IUH5 632 aa25.95■■□□□ 1.74
GTF2A1-201ENST00000298173 PIK3R5Q8WYR1 880 aa25.95■■□□□ 1.74
GTF2A1-201ENST00000298173 AAASQ9NRG9 546 aa25.95■■□□□ 1.74
GTF2A1-201ENST00000298173 HHLA1C9JL84 531 aa25.94■■□□□ 1.74
GTF2A1-201ENST00000298173 MYO1FO00160 1098 aa25.94■■□□□ 1.74
GTF2A1-201ENST00000298173 PIK3R2O00459 728 aa25.94■■□□□ 1.74
GTF2A1-201ENST00000298173 BDNFP23560 247 aa25.94■■□□□ 1.74
GTF2A1-201ENST00000298173 MESDQ14696 234 aa25.94■■□□□ 1.74
GTF2A1-201ENST00000298173 NFE2Q16621 373 aaPredicted RBP25.94■■□□□ 1.74
GTF2A1-201ENST00000298173 CFAP221Q4G0U5 840 aa25.94■■□□□ 1.74
GTF2A1-201ENST00000298173 SLC39A12Q504Y0 691 aa25.94■■□□□ 1.74
GTF2A1-201ENST00000298173 FAM183BPQ6ZVS7 135 aa25.94■■□□□ 1.74
GTF2A1-201ENST00000298173 SCUBE3Q8IX30 993 aa25.94■■□□□ 1.74
GTF2A1-201ENST00000298173 KHSRPQ92945 711 aaKnown RBP eCLIP25.94■■□□□ 1.743e-7■■■■□ 19.4
GTF2A1-201ENST00000298173 RHOBTB2Q9BYZ6 727 aa25.94■■□□□ 1.74
GTF2A1-201ENST00000298173 BACE2Q9Y5Z0 518 aa25.94■■□□□ 1.74
GTF2A1-201ENST00000298173 KRT3P12035 628 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 PRLRP16471 622 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 RAB41Q5JT25 222 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 OLFML1Q6UWY5 402 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 SPATA2LQ8IUW3 424 aaPredicted RBP25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 UBE2Q2Q8WVN8 375 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 FUBP3Q96I24 572 aaKnown RBP eCLIP25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 SELENOOQ9BVL4 669 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 MTRRQ9UBK8 725 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 TMEM59LQ9UK28 342 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 NR2E3Q9Y5X4 410 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 GOLGA8SH3BPF8 625 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 NCK2O43639 380 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 RFC1P35251 1148 aaPredicted RBP25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 PPM1AP35813 382 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 SLC6A3Q01959 620 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 DSG1Q02413 1049 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 GPR17Q13304 367 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 OR6B2Q6IFH4 312 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 SLC8B1Q6J4K2 584 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 PRSS55Q6UWB4 352 aaPredicted RBP25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 PEX26Q7Z412 305 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 PIWIL1Q96J94 861 aaKnown RBP25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 MCEEQ96PE7 176 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 HERC2P3Q9BVR0 1158 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 AMFRQ9UKV5 643 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 PCDHB12Q9Y5F1 795 aa25.93■■□□□ 1.74
GTF2A1-201ENST00000298173 TLL1O43897 1013 aa25.92■■□□□ 1.74
GTF2A1-201ENST00000298173 URI1O94763 535 aaPredicted RBP25.92■■□□□ 1.74
GTF2A1-201ENST00000298173 SCNN1AP37088 669 aa25.92■■□□□ 1.74
GTF2A1-201ENST00000298173 OGDHQ02218 1023 aa25.92■■□□□ 1.74
GTF2A1-201ENST00000298173 DCUN1D2Q6PH85 259 aa25.92■■□□□ 1.74
GTF2A1-201ENST00000298173 JOSD2Q8TAC2 188 aa25.92■■□□□ 1.74
GTF2A1-201ENST00000298173 RIN2Q8WYP3 895 aaPredicted RBP25.92■■□□□ 1.74
GTF2A1-201ENST00000298173 HES6Q96HZ4 224 aa25.92■■□□□ 1.74
GTF2A1-201ENST00000298173 L2HGDHQ9H9P8 463 aa25.92■■□□□ 1.74
GTF2A1-201ENST00000298173 PNPLA8Q9NP80 782 aa25.92■■□□□ 1.74
GTF2A1-201ENST00000298173 HYOU1Q9Y4L1 999 aa25.92■■□□□ 1.74
GTF2A1-201ENST00000298173 PROSCO94903 275 aa25.91■■□□□ 1.74
GTF2A1-201ENST00000298173 COMTP21964 271 aa25.91■■□□□ 1.74
GTF2A1-201ENST00000298173 CYP2F1P24903 491 aa25.91■■□□□ 1.74
GTF2A1-201ENST00000298173 SMARCB1Q12824 385 aa25.91■■□□□ 1.74
GTF2A1-201ENST00000298173 C9orf50Q5SZB4 431 aa25.91■■□□□ 1.74
GTF2A1-201ENST00000298173 FBXO22Q8NEZ5 403 aa25.91■■□□□ 1.74
GTF2A1-201ENST00000298173 FNIP1Q8TF40 1166 aa25.91■■□□□ 1.74
GTF2A1-201ENST00000298173 DMAP1Q9NPF5 467 aaPredicted RBP25.91■■□□□ 1.74
GTF2A1-201ENST00000298173 SNX12Q9UMY4 172 aa25.91■■□□□ 1.74
GTF2A1-201ENST00000298173 PACSIN2Q9UNF0 486 aaPredicted RBP25.91■■□□□ 1.74
GTF2A1-201ENST00000298173 LCHNA4D1U4 455 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 LCP1P13796 627 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 MAGEA10P43363 369 aaPredicted RBP25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 RABGGTBP53611 331 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 ADCY1Q08828 1119 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 ZNF252P-AS1Q0IIN9 211 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 FAM102AQ5T9C2 384 aaPredicted RBP25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 CD101Q93033 1021 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 METTL5Q9NRN9 209 aaKnown RBP25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 IP6K2Q9UHH9 426 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 LCMT1Q9UIC8 334 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 SAR1BQ9Y6B6 198 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 PATJQ8NI35 1801 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 VNN2O95498 520 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 SLC1A1P43005 524 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 PSMD5Q16401 504 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 KIAA1841Q6NSI8 718 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 VSTM1Q6UX27 236 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 ARCQ7LC44 396 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 CPNE8Q86YQ8 564 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 GPR65Q8IYL9 337 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 LRRC4Q9HBW1 653 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 STK39Q9UEW8 545 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 PCDHB5Q9Y5E4 795 aa25.9■■□□□ 1.74
GTF2A1-201ENST00000298173 CDY1Q9Y6F8 540 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms