RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 TMC6Q7Z403 805 aa23.9■■□□□ 1.42
LINC01116-201ENST00000295549 NOP9Q86U38 636 aaKnown RBP23.9■■□□□ 1.42
LINC01116-201ENST00000295549 SMG7Q92540 1137 aaKnown RBP23.9■■□□□ 1.42
LINC01116-201ENST00000295549 ZNF512Q96ME7 567 aaPredicted RBP23.9■■□□□ 1.42
LINC01116-201ENST00000295549 CD207Q9UJ71 328 aa23.9■■□□□ 1.42
LINC01116-201ENST00000295549 NOCTQ9UK39 431 aaKnown RBP23.9■■□□□ 1.42
LINC01116-201ENST00000295549 TPM1P09493 284 aa23.89■■□□□ 1.41
LINC01116-201ENST00000295549 CSH1P0DML2 217 aa23.89■■□□□ 1.41
LINC01116-201ENST00000295549 CSH2P0DML3 217 aa23.89■■□□□ 1.41
LINC01116-201ENST00000295549 KRT9P35527 623 aa23.89■■□□□ 1.41
LINC01116-201ENST00000295549 ARID5AQ03989 594 aa23.89■■□□□ 1.41
LINC01116-201ENST00000295549 CES5AQ6NT32 575 aa23.89■■□□□ 1.41
LINC01116-201ENST00000295549 DNAJB7Q7Z6W7 309 aaPredicted RBP23.89■■□□□ 1.41
LINC01116-201ENST00000295549 UBA3Q8TBC4 463 aa23.89■■□□□ 1.41
LINC01116-201ENST00000295549 GPR152Q8TDT2 470 aa23.89■■□□□ 1.41
LINC01116-201ENST00000295549 GIPC2Q8TF65 315 aa23.89■■□□□ 1.41
LINC01116-201ENST00000295549 LHX5Q9H2C1 402 aa23.89■■□□□ 1.41
LINC01116-201ENST00000295549 PRUNE2Q8WUY3 3088 aa23.88■■□□□ 1.41
LINC01116-201ENST00000295549 PTPRDP23468 1912 aa23.88■■□□□ 1.41
LINC01116-201ENST00000295549 HHLA1C9JL84 531 aa23.88■■□□□ 1.41
LINC01116-201ENST00000295549 H3BQ06 376 aaPredicted RBP23.88■■□□□ 1.41
LINC01116-201ENST00000295549 M0QYV0 167 aa23.88■■□□□ 1.41
LINC01116-201ENST00000295549 TNFRSF10BO14763 440 aa23.88■■□□□ 1.41
LINC01116-201ENST00000295549 XPO1O14980 1071 aaKnown RBP23.88■■□□□ 1.41
LINC01116-201ENST00000295549 PTPN2P17706 415 aa23.88■■□□□ 1.41
LINC01116-201ENST00000295549 CDC25BP30305 580 aa23.88■■□□□ 1.41
LINC01116-201ENST00000295549 PDE4CQ08493 712 aa23.88■■□□□ 1.41
LINC01116-201ENST00000295549 DENND5BQ6ZUT9 1274 aa23.88■■□□□ 1.41
LINC01116-201ENST00000295549 SLC35F5Q8WV83 523 aa23.88■■□□□ 1.41
LINC01116-201ENST00000295549 PIDD1Q9HB75 910 aa23.88■■□□□ 1.41
LINC01116-201ENST00000295549 CFHP08603 1231 aa23.87■■□□□ 1.41
LINC01116-201ENST00000295549 HMGA1P17096 107 aaKnown RBP23.87■■□□□ 1.41
LINC01116-201ENST00000295549 HNRNPH3P31942 346 aaKnown RBP23.87■■□□□ 1.41
LINC01116-201ENST00000295549 PRKCIP41743 596 aa23.87■■□□□ 1.41
LINC01116-201ENST00000295549 GPD2P43304 727 aa23.87■■□□□ 1.41
LINC01116-201ENST00000295549 PLA2G4AP47712 749 aa23.87■■□□□ 1.41
LINC01116-201ENST00000295549 CDR2Q01850 454 aa23.87■■□□□ 1.41
LINC01116-201ENST00000295549 ARID5BQ14865 1188 aa23.87■■□□□ 1.41
LINC01116-201ENST00000295549 ASIC2Q16515 512 aa23.87■■□□□ 1.41
LINC01116-201ENST00000295549 ATAT1Q5SQI0 421 aa23.87■■□□□ 1.41
LINC01116-201ENST00000295549 E4F1Q66K89 784 aaPredicted RBP23.87■■□□□ 1.41
LINC01116-201ENST00000295549 NUP93Q8N1F7 819 aa23.87■■□□□ 1.41
LINC01116-201ENST00000295549 FEZF2Q8TBJ5 459 aa23.87■■□□□ 1.41
LINC01116-201ENST00000295549 MYRFLQ96LU7 910 aa23.87■■□□□ 1.41
LINC01116-201ENST00000295549 DNAJC7Q99615 494 aa23.87■■□□□ 1.41
LINC01116-201ENST00000295549 APOL5Q9BWW9 433 aa23.87■■□□□ 1.41
LINC01116-201ENST00000295549 IL37Q9NZH6 218 aa23.87■■□□□ 1.41
LINC01116-201ENST00000295549 EHD2Q9NZN4 543 aa23.87■■□□□ 1.41
LINC01116-201ENST00000295549 DNMT3BQ9UBC3 853 aaKnown RBP23.87■■□□□ 1.41
LINC01116-201ENST00000295549 COL6A3P12111 3177 aa23.87■■□□□ 1.41
LINC01116-201ENST00000295549 SLC38A8A6NNN8 435 aa23.86■■□□□ 1.41
LINC01116-201ENST00000295549 SSTR3P32745 418 aaPredicted RBP23.86■■□□□ 1.41
LINC01116-201ENST00000295549 EPHA5P54756 1037 aa23.86■■□□□ 1.41
LINC01116-201ENST00000295549 TAF12Q16514 161 aa23.86■■□□□ 1.41
LINC01116-201ENST00000295549 LEXMQ3ZCV2 418 aa23.86■■□□□ 1.41
LINC01116-201ENST00000295549 DENND1BQ6P3S1 775 aa23.86■■□□□ 1.41
LINC01116-201ENST00000295549 PIGZQ86VD9 579 aa23.86■■□□□ 1.41
LINC01116-201ENST00000295549 LEMD2Q8NC56 503 aa23.86■■□□□ 1.41
LINC01116-201ENST00000295549 OR8K1Q8NGG5 319 aa23.86■■□□□ 1.41
LINC01116-201ENST00000295549 STK32AQ8WU08 396 aa23.86■■□□□ 1.41
LINC01116-201ENST00000295549 SLC20A1Q8WUM9 679 aa23.86■■□□□ 1.41
LINC01116-201ENST00000295549 SECISBP2LQ93073 1101 aaKnown RBP23.86■■□□□ 1.41
LINC01116-201ENST00000295549 TRMT2BQ96GJ1 504 aaKnown RBP23.86■■□□□ 1.41
LINC01116-201ENST00000295549 RIPOR3Q96MK2 946 aa23.86■■□□□ 1.41
LINC01116-201ENST00000295549 TTLL2Q9BWV7 592 aa23.86■■□□□ 1.41
LINC01116-201ENST00000295549 AVENQ9NQS1 362 aaPredicted RBP23.86■■□□□ 1.41
LINC01116-201ENST00000295549 COMMD8Q9NX08 183 aa23.86■■□□□ 1.41
LINC01116-201ENST00000295549 MFAP3LO75121 409 aa23.85■■□□□ 1.41
LINC01116-201ENST00000295549 RTN3O95197 1032 aaPredicted RBP23.85■■□□□ 1.41
LINC01116-201ENST00000295549 SLC5A3P53794 718 aa23.85■■□□□ 1.41
LINC01116-201ENST00000295549 MTMR3Q13615 1198 aa23.85■■□□□ 1.41
LINC01116-201ENST00000295549 CLUL1Q15846 466 aa23.85■■□□□ 1.41
LINC01116-201ENST00000295549 RAB41Q5JT25 222 aa23.85■■□□□ 1.41
LINC01116-201ENST00000295549 TAF3Q5VWG9 929 aa23.85■■□□□ 1.41
LINC01116-201ENST00000295549 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.85■■□□□ 1.41
LINC01116-201ENST00000295549 GPIHBP1Q8IV16 184 aa23.85■■□□□ 1.41
LINC01116-201ENST00000295549 CNGA4Q8IV77 575 aa23.85■■□□□ 1.41
LINC01116-201ENST00000295549 KCTD13Q8WZ19 329 aa23.85■■□□□ 1.41
LINC01116-201ENST00000295549 SUSD6Q92537 303 aa23.85■■□□□ 1.41
LINC01116-201ENST00000295549 CORO1BQ9BR76 489 aa23.85■■□□□ 1.41
LINC01116-201ENST00000295549 LRRC3Q9BY71 257 aa23.85■■□□□ 1.41
LINC01116-201ENST00000295549 ASAH2Q9NR71 780 aa23.85■■□□□ 1.41
LINC01116-201ENST00000295549 BZW2Q9Y6E2 419 aaKnown RBP23.85■■□□□ 1.41
LINC01116-201ENST00000295549 TULP2O00295 520 aa23.84■■□□□ 1.41
LINC01116-201ENST00000295549 LSM8O95777 96 aaKnown RBP23.84■■□□□ 1.41
LINC01116-201ENST00000295549 RHOP08100 348 aa23.84■■□□□ 1.41
LINC01116-201ENST00000295549 MMEP08473 750 aa23.84■■□□□ 1.41
LINC01116-201ENST00000295549 CHRNB2P17787 502 aa23.84■■□□□ 1.41
LINC01116-201ENST00000295549 CDH5P33151 784 aaPredicted RBP23.84■■□□□ 1.41
LINC01116-201ENST00000295549 MTHFRP42898 656 aa23.84■■□□□ 1.41
LINC01116-201ENST00000295549 RPL34P49207 117 aaKnown RBP23.84■■□□□ 1.41
LINC01116-201ENST00000295549 MRE11P49959 708 aa23.84■■□□□ 1.41
LINC01116-201ENST00000295549 FMO1Q01740 532 aa23.84■■□□□ 1.41
LINC01116-201ENST00000295549 SMAD4Q13485 552 aaKnown RBP23.84■■□□□ 1.41
LINC01116-201ENST00000295549 PMF1Q6P1K2 205 aa23.84■■□□□ 1.41
LINC01116-201ENST00000295549 GRASPQ7Z6J2 395 aaPredicted RBP23.84■■□□□ 1.41
LINC01116-201ENST00000295549 TMC8Q8IU68 726 aa23.84■■□□□ 1.41
LINC01116-201ENST00000295549 DRC7Q8IY82 874 aa23.84■■□□□ 1.41
LINC01116-201ENST00000295549 HSFY1Q96LI6 401 aa23.84■■□□□ 1.41
LINC01116-201ENST00000295549 NECTIN4Q96NY8 510 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms