RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 KCNJ1P48048 391 aa18.17■□□□□ 0.5
PCDHA13-201ENST00000289272 CPA2P48052 419 aa18.17■□□□□ 0.5
PCDHA13-201ENST00000289272 SNX17Q15036 470 aa18.17■□□□□ 0.5
PCDHA13-201ENST00000289272 LMBRD2Q68DH5 695 aaPredicted RBP18.17■□□□□ 0.5
PCDHA13-201ENST00000289272 SLC30A5Q8TAD4 765 aa18.17■□□□□ 0.5
PCDHA13-201ENST00000289272 PAFAH2Q99487 392 aa18.17■□□□□ 0.5
PCDHA13-201ENST00000289272 C1orf50Q9BV19 199 aa18.17■□□□□ 0.5
PCDHA13-201ENST00000289272 GOLPH3Q9H4A6 298 aa18.17■□□□□ 0.5
PCDHA13-201ENST00000289272 ELP3Q9H9T3 547 aa18.17■□□□□ 0.5
PCDHA13-201ENST00000289272 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.17■□□□□ 0.5
PCDHA13-201ENST00000289272 AP1G2O75843 785 aa18.17■□□□□ 0.5
PCDHA13-201ENST00000289272 GSNP06396 782 aa18.17■□□□□ 0.5
PCDHA13-201ENST00000289272 CETPP11597 493 aa18.17■□□□□ 0.5
PCDHA13-201ENST00000289272 C21orf59P57076 290 aa18.17■□□□□ 0.5
PCDHA13-201ENST00000289272 SH2D3AQ9BRG2 576 aa18.17■□□□□ 0.5
PCDHA13-201ENST00000289272 VIRMAQ69YN4 1812 aaKnown RBP18.17■□□□□ 0.5
PCDHA13-201ENST00000289272 BCL10O95999 233 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 PYGLP06737 847 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 SH3RF1Q7Z6J0 888 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 LUZP2Q86TE4 346 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 CCDC103Q8IW40 242 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 MTMR8Q96EF0 704 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 ZBED2Q9BTP6 218 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 MYO1DO94832 1006 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 APRTP07741 180 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 RAB15P59190 212 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 RAB14P61106 215 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 NDUFA5Q16718 116 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 C1orf228Q6PIY5 440 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 VGLL2Q8N8G2 317 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 KLHL23Q8NBE8 558 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 RIOX1Q9H6W3 641 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 RSL24D1Q9UHA3 163 aaKnown RBP18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 FAM153BP0C7A2 387 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 KCNK10P57789 538 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 NAB1Q13506 487 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 FAM153CQ494X1 144 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 PCDH9Q9HC56 1237 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 MED24O75448 989 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 MLH1P40692 756 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 CNGA2Q16280 664 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 OR6J1Q8NGC5 347 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 ASAP3Q8TDY4 903 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 APOPT1Q96IL0 206 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 TNIP3Q96KP6 325 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 ZNF518BQ9C0D4 1074 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 TASP1Q9H6P5 420 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 ZFYVE28Q9HCC9 887 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 TIMMDC1Q9NPL8 285 aa18.16■□□□□ 0.5
PCDHA13-201ENST00000289272 NR1H2P55055 460 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 BAATQ14032 418 aaPredicted RBP18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 TXNRD3Q86VQ6 643 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 LRMDAQ9H2I8 198 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 SEMA4AQ9H3S1 761 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 STN1Q9H668 368 aaKnown RBP18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 VTI1BQ9UEU0 232 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 TNS2Q63HR2 1409 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 PTK6Q13882 451 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 SGSM1Q2NKQ1 1148 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 EXT2Q93063 718 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 ULK4Q96C45 1275 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 BRD8Q9H0E9 1235 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 GPBP1L1Q9HC44 474 aaPredicted RBP18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 AGPAT3Q9NRZ7 376 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 MAGED2Q9UNF1 606 aaPredicted RBP18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 FCHO1O14526 889 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 MYL4P12829 197 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 AQP5P55064 265 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 C4orf50Q6ZRC1 276 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 ANKRD13AQ8IZ07 590 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 SH3TC2Q8TF17 1288 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 SKA2Q8WVK7 121 aaPredicted RBP18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 RSPH1Q8WYR4 309 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 LENG1Q96BZ8 264 aaPredicted RBP18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 PGBD4Q96DM1 585 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 C17orf75Q9HAS0 396 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 TIMM44O43615 452 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 ASNA1O43681 348 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 DLGAP3O95886 979 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 NR3C2P08235 984 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 TGFB2P61812 414 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 TAF1CQ15572 869 aaPredicted RBP18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 MICU2Q8IYU8 434 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 KYQ8NBH2 561 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 TUBGCP4Q9UGJ1 667 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 CIDEBQ9UHD4 219 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 ARHGAP23Q9P227 1491 aa18.15■□□□□ 0.5
PCDHA13-201ENST00000289272 C3orf70A6NLC5 250 aaPredicted RBP18.14■□□□□ 0.5
PCDHA13-201ENST00000289272 EPHB2P29323 1055 aa18.14■□□□□ 0.5
PCDHA13-201ENST00000289272 KRT72Q14CN4 511 aa18.14■□□□□ 0.5
PCDHA13-201ENST00000289272 PLEKHA7Q6IQ23 1121 aa18.14■□□□□ 0.5
PCDHA13-201ENST00000289272 TAF2Q6P1X5 1199 aa18.14■□□□□ 0.5
PCDHA13-201ENST00000289272 NPTXRO95502 500 aa18.14■□□□□ 0.49
PCDHA13-201ENST00000289272 PRKCBP05771 671 aa18.14■□□□□ 0.49
PCDHA13-201ENST00000289272 GMPSP49915 693 aaPredicted RBP18.14■□□□□ 0.49
PCDHA13-201ENST00000289272 TBL3Q12788 808 aaKnown RBP18.14■□□□□ 0.49
PCDHA13-201ENST00000289272 OVGP1Q12889 678 aa18.14■□□□□ 0.49
PCDHA13-201ENST00000289272 PDK1Q15118 436 aa18.14■□□□□ 0.49
PCDHA13-201ENST00000289272 RUSC1Q9BVN2 902 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms