RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.85■□□□□ 0.61
CAPN1-201ENST00000279247 USP18Q9UMW8 372 aa18.85■□□□□ 0.61
CAPN1-201ENST00000279247 M0QZ92 97 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 TP73O15350 636 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 LIASO43766 372 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 GNL1P36915 607 aaPredicted RBP18.84■□□□□ 0.61
CAPN1-201ENST00000279247 SF3A3Q12874 501 aaKnown RBP eCLIP18.84■□□□□ 0.618e-10■■■■□ 21.2
CAPN1-201ENST00000279247 GPS1Q13098 491 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 ZNF268Q14587 947 aaPredicted RBP18.84■□□□□ 0.61
CAPN1-201ENST00000279247 LRIG3Q6UXM1 1119 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 CCDC33Q8N5R6 958 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 ACTL9Q8TC94 416 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 TXLNGYQ9BZA5 131 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 SNX25Q9H3E2 840 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 RSPH14Q9UHP6 348 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 PRDM4Q9UKN5 801 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 SYNJ2BP-COX16A0A087WUM0 186 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 FOXO6A8MYZ6 492 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 IVDP26440 423 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 CRYBB1P53674 252 aaPredicted RBP18.84■□□□□ 0.61
CAPN1-201ENST00000279247 ZBTB6Q15916 424 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 LONRF1Q17RB8 773 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 PAN2Q504Q3 1202 aaKnown RBP18.84■□□□□ 0.61
CAPN1-201ENST00000279247 SMG8Q8ND04 991 aaKnown RBP18.84■□□□□ 0.61
CAPN1-201ENST00000279247 PEBP4Q96S96 227 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 COX16Q9P0S2 106 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 HMGB1P1B2RPK0 211 aaPredicted RBP18.84■□□□□ 0.61
CAPN1-201ENST00000279247 ANKRD65E5RJM6 399 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 GNAT1P11488 350 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 YY1P25490 414 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 MLH1P40692 756 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 CDH6P55285 790 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 CDC42EP1Q00587 391 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 OTUD4Q01804 1114 aaKnown RBP18.84■□□□□ 0.61
CAPN1-201ENST00000279247 PTK6Q13882 451 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 NT5DC4Q86YG4 428 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 GAD1Q99259 594 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 AAASQ9NRG9 546 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 CNTN3Q9P232 1028 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 WDR35Q9P2L0 1181 aa18.84■□□□□ 0.61
CAPN1-201ENST00000279247 FEZ2Q9UHY8 353 aaPredicted RBP18.84■□□□□ 0.61
CAPN1-201ENST00000279247 CLDN5O00501 218 aa18.83■□□□□ 0.61
CAPN1-201ENST00000279247 RPS6KA5O75582 802 aa18.83■□□□□ 0.61
CAPN1-201ENST00000279247 TFE3P19532 575 aaPredicted RBP18.83■□□□□ 0.61
CAPN1-201ENST00000279247 GPD1P21695 349 aa18.83■□□□□ 0.61
CAPN1-201ENST00000279247 ATXN1P54253 815 aaKnown RBP18.83■□□□□ 0.61
CAPN1-201ENST00000279247 NOGQ13253 232 aa18.83■□□□□ 0.61
CAPN1-201ENST00000279247 NPNTQ6UXI9 565 aa18.83■□□□□ 0.61
CAPN1-201ENST00000279247 ZC3H18Q86VM9 953 aaKnown RBP18.83■□□□□ 0.61
CAPN1-201ENST00000279247 MDM1Q8TC05 714 aa18.83■□□□□ 0.61
CAPN1-201ENST00000279247 SLC2A14Q8TDB8 520 aa18.83■□□□□ 0.61
CAPN1-201ENST00000279247 BCAS4Q8TDM0 211 aa18.83■□□□□ 0.61
CAPN1-201ENST00000279247 MRRFQ96E11 262 aaKnown RBP18.83■□□□□ 0.61
CAPN1-201ENST00000279247 PPANQ9NQ55 473 aaKnown RBP18.83■□□□□ 0.61
CAPN1-201ENST00000279247 ST3GAL5Q9UNP4 418 aa18.83■□□□□ 0.61
CAPN1-201ENST00000279247 RIPK2O43353 540 aa18.83■□□□□ 0.6
CAPN1-201ENST00000279247 KDELR1P24390 212 aa18.83■□□□□ 0.6
CAPN1-201ENST00000279247 PPP6R3Q5H9R7 873 aaPredicted RBP18.83■□□□□ 0.6
CAPN1-201ENST00000279247 CCDC89Q8N998 374 aa18.83■□□□□ 0.6
CAPN1-201ENST00000279247 MCRS1Q96EZ8 462 aa18.83■□□□□ 0.6
CAPN1-201ENST00000279247 MAGEB5Q9BZ81 275 aa18.83■□□□□ 0.6
CAPN1-201ENST00000279247 KRT7P08729 469 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 SEC24CP53992 1094 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 IFI35P80217 286 aaPredicted RBP18.82■□□□□ 0.6
CAPN1-201ENST00000279247 ADCY1Q08828 1119 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 APPL2Q8NEU8 664 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 CD99L2Q8TCZ2 262 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 SELENOSQ9BQE4 189 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 DDX56Q9NY93 547 aaKnown RBP18.82■□□□□ 0.6
CAPN1-201ENST00000279247 DUSP11O75319 330 aaKnown RBP18.82■□□□□ 0.6
CAPN1-201ENST00000279247 ITIH2P19823 946 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 GDF10P55107 478 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 MFSD14CQ5VZR4 134 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 ALKAL1Q6UXT8 129 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 KBTBD7Q8WVZ9 684 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 ADAM33Q9BZ11 813 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 HOMER3Q9NSC5 361 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 WHRNQ9P202 907 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 TBK1Q9UHD2 729 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 HUS1O60921 280 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 THPOP40225 353 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 TAF6P49848 677 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 FCGRTP55899 365 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 SLMAPQ14BN4 828 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 ZC3H12AQ5D1E8 599 aaKnown RBP18.82■□□□□ 0.6
CAPN1-201ENST00000279247 C1orf228Q6PIY5 440 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 ASNSD1Q9NWL6 643 aa18.82■□□□□ 0.6
CAPN1-201ENST00000279247 PAPSS1O43252 624 aaPredicted RBP18.81■□□□□ 0.6
CAPN1-201ENST00000279247 PRPSAP2O60256 369 aa18.81■□□□□ 0.6
CAPN1-201ENST00000279247 GABBR2O75899 941 aa18.81■□□□□ 0.6
CAPN1-201ENST00000279247 RARGP13631 454 aa18.81■□□□□ 0.6
CAPN1-201ENST00000279247 PECAM1P16284 738 aaPredicted RBP18.81■□□□□ 0.6
CAPN1-201ENST00000279247 CCND3P30281 292 aaPredicted RBP18.81■□□□□ 0.6
CAPN1-201ENST00000279247 VEGFBP49765 207 aa18.81■□□□□ 0.6
CAPN1-201ENST00000279247 LRRC38Q5VT99 294 aa18.81■□□□□ 0.6
CAPN1-201ENST00000279247 NIPA2Q8N8Q9 360 aa18.81■□□□□ 0.6
CAPN1-201ENST00000279247 FAM149B1Q96BN6 582 aa18.81■□□□□ 0.6
CAPN1-201ENST00000279247 TRAIPQ9BWF2 469 aa18.81■□□□□ 0.6
CAPN1-201ENST00000279247 SPC25Q9HBM1 224 aa18.81■□□□□ 0.6
CAPN1-201ENST00000279247 I3L4J1 428 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms