RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 CCDC130P13994 396 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 VCPP55072 806 aaKnown RBP15.22■□□□□ 0.03
CNOT9-201ENST00000273064 NCKAP1LP55160 1127 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 TAP1Q03518 808 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 ZCCHC23Q6ZST2 131 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 LONP2Q86WA8 852 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 CDT1Q9H211 546 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 ACKR2O00590 384 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 ZC3H11AO75152 810 aaKnown RBP eCLIP15.21■□□□□ 0.039e-8■■□□□ 13
CNOT9-201ENST00000273064 CBX6O95503 412 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 EPHB2P29323 1055 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 TPI1P60174 286 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 LAMC2Q13753 1193 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 PRPSAP1Q14558 356 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 GRAMD1BQ3KR37 738 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 ARL13BQ3SXY8 428 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 KCNV1Q6PIU1 500 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 LRRC6Q86X45 466 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 SAMD3Q8N6K7 520 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 SKA2Q8WVK7 121 aaPredicted RBP15.21■□□□□ 0.03
CNOT9-201ENST00000273064 ZNF516Q92618 1163 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 SGSM3Q96HU1 749 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 GOLGA2P5Q9HBQ8 144 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 SLC24A3Q9HC58 644 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 HEY2Q9UBP5 337 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 ZNF214Q9UL59 606 aaPredicted RBP15.21■□□□□ 0.03
CNOT9-201ENST00000273064 CASTOR2A6NHX0 329 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 SPATA31C2B4DYI2 1134 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 TPH1P17752 444 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 GEMIN4P57678 1058 aaKnown RBP15.21■□□□□ 0.03
CNOT9-201ENST00000273064 C1QBPQ07021 282 aaKnown RBP15.21■□□□□ 0.03
CNOT9-201ENST00000273064 TAF5Q15542 800 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 MTDHQ86UE4 582 aaKnown RBP15.21■□□□□ 0.03
CNOT9-201ENST00000273064 USP6NLQ92738 828 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 ZNF669Q96BR6 464 aaPredicted RBP15.21■□□□□ 0.03
CNOT9-201ENST00000273064 CELF6Q96J87 481 aaKnown RBP15.21■□□□□ 0.03
CNOT9-201ENST00000273064 FSD1LQ9BXM9 530 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 ARMCX1Q9P291 453 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 MYH11P35749 1972 aa15.21■□□□□ 0.03
CNOT9-201ENST00000273064 CD48P09326 243 aa15.21■□□□□ 0.02
CNOT9-201ENST00000273064 RBL1P28749 1068 aa15.21■□□□□ 0.02
CNOT9-201ENST00000273064 CHI3L2Q15782 390 aa15.21■□□□□ 0.02
CNOT9-201ENST00000273064 ZC3H12AQ5D1E8 599 aaKnown RBP15.21■□□□□ 0.02
CNOT9-201ENST00000273064 C1orf146Q5VVC0 180 aa15.21■□□□□ 0.02
CNOT9-201ENST00000273064 TXNRD3NBQ6F5E7 133 aa15.21■□□□□ 0.02
CNOT9-201ENST00000273064 SYDE1Q6ZW31 735 aaPredicted RBP15.21■□□□□ 0.02
CNOT9-201ENST00000273064 ZMYM2Q9UBW7 1377 aa15.21■□□□□ 0.02
CNOT9-201ENST00000273064 KBTBD13C9JR72 458 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 NFKBIEO00221 500 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 TBC1D12O60347 775 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 CYP1A2P05177 515 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 BGNP21810 368 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 ZNF157P51786 506 aaPredicted RBP15.2■□□□□ 0.02
CNOT9-201ENST00000273064 MAP3K7CLP57077 242 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 SKOR1P84550 965 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 NR1H3Q13133 447 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 LENG1Q96BZ8 264 aaPredicted RBP15.2■□□□□ 0.02
CNOT9-201ENST00000273064 PABPC5Q96DU9 382 aaKnown RBP15.2■□□□□ 0.02
CNOT9-201ENST00000273064 TNIP3Q96KP6 325 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 ATXN3LQ9H3M9 355 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 MAP3K20Q9NYL2 800 aaKnown RBP15.2■□□□□ 0.02
CNOT9-201ENST00000273064 A0A1W2PPM1 405 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 PABPN1LA6NDY0 278 aaKnown RBP15.2■□□□□ 0.02
CNOT9-201ENST00000273064 TTLL13PA6NNM8 815 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 PMPCBO75439 489 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
CNOT9-201ENST00000273064 DGKIO75912 1065 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 HMGCRP04035 888 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 EPHX2P34913 555 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 GLRBP48167 497 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 RABGGTBP53611 331 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 DGKDQ16760 1214 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 ATG16L1Q676U5 607 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 FAM117BQ6P1L5 589 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 DNERQ8NFT8 737 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 TCP10LQ8TDR4 215 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 THTPAQ9BU02 230 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 ADARB2Q9NS39 739 aaKnown RBP15.2■□□□□ 0.02
CNOT9-201ENST00000273064 GTSE1Q9NYZ3 720 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 APOBEC2Q9Y235 224 aaKnown RBP15.2■□□□□ 0.02
CNOT9-201ENST00000273064 PDHXO00330 501 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 TRPA1O75762 1119 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 SH2D4BQ5SQS7 431 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 KIAA1841Q6NSI8 718 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 TFAP2BQ92481 460 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 PPWD1Q96BP3 646 aaKnown RBP15.2■□□□□ 0.02
CNOT9-201ENST00000273064 LPIN3Q9BQK8 851 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 NOCTQ9UK39 431 aaKnown RBP15.2■□□□□ 0.02
CNOT9-201ENST00000273064 USH1CQ9Y6N9 552 aa15.2■□□□□ 0.02
CNOT9-201ENST00000273064 COL14A1Q05707 1796 aaKnown RBP15.2■□□□□ 0.02
CNOT9-201ENST00000273064 KLRG2A4D1S0 409 aaPredicted RBP15.19■□□□□ 0.02
CNOT9-201ENST00000273064 H3BRJ5 948 aa15.19■□□□□ 0.02
CNOT9-201ENST00000273064 RPA3P35244 121 aaPredicted RBP15.19■□□□□ 0.02
CNOT9-201ENST00000273064 EFTUD2Q15029 972 aaKnown RBP eCLIP15.19■□□□□ 0.022e-6■■■■■ 47
CNOT9-201ENST00000273064 FASTKD1Q53R41 847 aaKnown RBP15.19■□□□□ 0.02
CNOT9-201ENST00000273064 RASIP1Q5U651 963 aa15.19■□□□□ 0.02
CNOT9-201ENST00000273064 SLC25A41Q8N5S1 370 aa15.19■□□□□ 0.02
CNOT9-201ENST00000273064 RAB3IL1Q8TBN0 382 aa15.19■□□□□ 0.02
CNOT9-201ENST00000273064 MANSC1Q9H8J5 431 aa15.19■□□□□ 0.02
CNOT9-201ENST00000273064 NOD2Q9HC29 1040 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms