RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 ACER1Q8TDN7 264 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 ACTRT2Q8TDY3 377 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 GFM2Q969S9 779 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 TSSK1BQ9BXA7 367 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 MRPS26Q9BYN8 205 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 PLGRKTQ9HBL7 147 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 PCDHA12Q9UN75 941 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 SMG5Q9UPR3 1016 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 INPP5FQ9Y2H2 1132 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 GIT1Q9Y2X7 761 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 ATP8B3O60423 1300 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 E9PMD0 336 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 ADCY8P40145 1251 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 CASP5P51878 434 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 DCDC5Q6ZRR9 648 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 DEFB132Q7Z7B7 95 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 MARVELD2Q8N4S9 558 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 STARD8Q92502 1023 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.42■□□□□ 0.225e-6■□□□□ 10.3
CTDSP1-201ENST00000273062 MTUS1Q9ULD2 1270 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 ATRNL1Q5VV63 1379 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 SMCHD1A6NHR9 2005 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 POTEB3A0JP26 581 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 SPDYE2BA6NHP3 402 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 POTECB2RU33 542 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 DGKIO75912 1065 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 OCM2P0CE71 109 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 OCMP0CE72 109 aaPredicted RBP16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 SPDYE6P0CI01 402 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 THRAP10827 490 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 PLS3P13797 630 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 PHKA2P46019 1235 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 APOFQ13790 326 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 PSMD6Q15008 389 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 SGO2Q562F6 1265 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 DEPDC1Q5TB30 811 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 ITPRIPL1Q6GPH6 555 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 SNRNP48Q6IEG0 339 aaKnown RBP16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 POTEBQ6S5H4 581 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 SLC30A10Q6XR72 485 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 ADGRG6Q86SQ4 1221 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 CROCCP3Q8IVE0 287 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 ICA1LQ8NDH6 482 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 ATP6V0A1Q93050 837 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 CCDC77Q9BR77 488 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 SYT11Q9BT88 431 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 MANSC1Q9H8J5 431 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 CCPG1Q9ULG6 757 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 FRMPD4Q14CM0 1322 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 ITM2AO43736 263 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 FKBP6O75344 327 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 RAG1P15918 1043 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 CIITAP33076 1130 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 NEK2P51955 445 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 SLC5A3P53794 718 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 SLC25A3Q00325 362 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 ATP1A4Q13733 1029 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 SYCP2LQ5T4T6 812 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 MAP3K21Q5TCX8 1036 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 ERI1Q8IV48 349 aaKnown RBP16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 ZFRQ96KR1 1074 aaKnown RBP16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 LRRC19Q9H756 370 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 UVRAGQ9P2Y5 699 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 STK17AQ9UEE5 414 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 RSL24D1Q9UHA3 163 aaKnown RBP16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 PCDHA2Q9Y5H9 948 aa16.41■□□□□ 0.22
CTDSP1-201ENST00000273062 ARHGAP42A6NI28 874 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 ENTPD3O75355 529 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 ATF2P15336 505 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 STAT1P42224 750 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 ACADVLP49748 655 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 PDK1Q15118 436 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 PRR16Q569H4 304 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 RALGPS1Q5JS13 557 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 RSBN1LQ6PCB5 846 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 LARGE2Q8N3Y3 721 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 GMCL1P1Q8NEA9 526 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 CYP2W1Q8TAV3 490 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 TCP10LQ8TDR4 215 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 ZNF512Q96ME7 567 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 GPATCH1Q9BRR8 931 aaKnown RBP16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 RAB34Q9BZG1 259 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 KIAA1024Q9UPX6 916 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 TRPA1O75762 1119 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 BMP3P12645 472 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 CPA3P15088 417 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 DPEP1P16444 411 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 MAGEA4P43358 317 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 CASP4P49662 377 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 EPHB1P54762 984 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 PCNX4Q63HM2 1172 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 ZNF746Q6NUN9 644 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 ALDH16A1Q8IZ83 802 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 C12orf50Q8NA57 414 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 GRIN3AQ8TCU5 1115 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 PYROXD1Q8WU10 500 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 SLC20A1Q8WUM9 679 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 AMNQ9BXJ7 453 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 OSBPL6Q9BZF3 934 aa16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 TMEM39BQ9GZU3 492 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms