RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 RSPO2Q6UXX9 243 aaPredicted RBP26.07■■□□□ 1.76
SSBP4-201ENST00000270061 CXorf38Q8TB03 319 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 SMG7Q92540 1137 aaKnown RBP26.07■■□□□ 1.76
SSBP4-201ENST00000270061 VRTNQ9H8Y1 702 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 USTQ9Y2C2 406 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 NCANO14594 1321 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 C2CD4DB7Z1M9 353 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 MMEP08473 750 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 PRLRP16471 622 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 ATICP31939 592 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 NAP1L1P55209 391 aaKnown RBP26.07■■□□□ 1.76
SSBP4-201ENST00000270061 ZNF699Q32M78 642 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 TDRD5Q8NAT2 981 aaKnown RBP26.07■■□□□ 1.76
SSBP4-201ENST00000270061 APPL2Q8NEU8 664 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 PIDD1Q9HB75 910 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 ACP6Q9NPH0 428 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 TAS2R14Q9NYV8 317 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 PCDHB4Q9Y5E5 795 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 SAR1BQ9Y6B6 198 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 DOCK8Q8NF50 2099 aa26.06■■□□□ 1.76
SSBP4-201ENST00000270061 MYH10P35580 1976 aa26.06■■□□□ 1.76
SSBP4-201ENST00000270061 H7C4K7 107 aa26.06■■□□□ 1.76
SSBP4-201ENST00000270061 ENC1O14682 589 aa26.06■■□□□ 1.76
SSBP4-201ENST00000270061 ZMYND10O75800 440 aa26.06■■□□□ 1.76
SSBP4-201ENST00000270061 TCEAL1Q15170 157 aa26.06■■□□□ 1.76
SSBP4-201ENST00000270061 WHAMMP3Q1A5X7 153 aa26.06■■□□□ 1.76
SSBP4-201ENST00000270061 TMEM31Q5JXX7 168 aa26.06■■□□□ 1.76
SSBP4-201ENST00000270061 CTNNBL1Q8WYA6 563 aaPredicted RBP26.06■■□□□ 1.76
SSBP4-201ENST00000270061 CARD6Q9BX69 1037 aa26.06■■□□□ 1.76
SSBP4-201ENST00000270061 GPR37L1O60883 481 aa26.05■■□□□ 1.76
SSBP4-201ENST00000270061 PAPLNO95428 1278 aa26.05■■□□□ 1.76
SSBP4-201ENST00000270061 ZNF132P52740 706 aa26.05■■□□□ 1.76
SSBP4-201ENST00000270061 TAF3Q5VWG9 929 aa26.05■■□□□ 1.76
SSBP4-201ENST00000270061 DNAAF5Q86Y56 855 aa26.05■■□□□ 1.76
SSBP4-201ENST00000270061 ZNF707Q96C28 371 aaPredicted RBP26.05■■□□□ 1.76
SSBP4-201ENST00000270061 CALR3Q96L12 384 aaKnown RBP26.05■■□□□ 1.76
SSBP4-201ENST00000270061 PRKD2Q9BZL6 878 aa26.05■■□□□ 1.76
SSBP4-201ENST00000270061 ITGA11Q9UKX5 1188 aa26.05■■□□□ 1.76
SSBP4-201ENST00000270061 PCDHB8Q9UN66 801 aa26.05■■□□□ 1.76
SSBP4-201ENST00000270061 TECTAO75443 2155 aa26.05■■□□□ 1.76
SSBP4-201ENST00000270061 FTLP02792 175 aaPredicted RBP26.05■■□□□ 1.76
SSBP4-201ENST00000270061 C8AP07357 584 aa26.05■■□□□ 1.76
SSBP4-201ENST00000270061 MRPL58Q14197 206 aaKnown RBP26.05■■□□□ 1.76
SSBP4-201ENST00000270061 SLC8B1Q6J4K2 584 aa26.05■■□□□ 1.76
SSBP4-201ENST00000270061 MNS1Q8NEH6 495 aa26.05■■□□□ 1.76
SSBP4-201ENST00000270061 RFFLQ8WZ73 363 aa26.05■■□□□ 1.76
SSBP4-201ENST00000270061 WDR6Q9NNW5 1121 aaKnown RBP26.05■■□□□ 1.76
SSBP4-201ENST00000270061 C11orf16Q9NQ32 467 aa26.05■■□□□ 1.76
SSBP4-201ENST00000270061 FAM86C2PA6NEL3 165 aa26.04■■□□□ 1.76
SSBP4-201ENST00000270061 TMCO5BA8MYB1 307 aa26.04■■□□□ 1.76
SSBP4-201ENST00000270061 M0QZQ0 153 aa26.04■■□□□ 1.76
SSBP4-201ENST00000270061 PALMO75781 387 aa26.04■■□□□ 1.76
SSBP4-201ENST00000270061 STAU1O95793 577 aaKnown RBP26.04■■□□□ 1.76
SSBP4-201ENST00000270061 AARSP49588 968 aaKnown RBP eCLIP26.04■■□□□ 1.764e-6■■■■■ 38
SSBP4-201ENST00000270061 YWHAEP62258 255 aaKnown RBP26.04■■□□□ 1.76
SSBP4-201ENST00000270061 PPM1LQ5SGD2 360 aa26.04■■□□□ 1.76
SSBP4-201ENST00000270061 C9orf57Q5W0N0 161 aa26.04■■□□□ 1.76
SSBP4-201ENST00000270061 ZNF280DQ6N043 979 aa26.04■■□□□ 1.76
SSBP4-201ENST00000270061 TMEM270Q6UE05 265 aa26.04■■□□□ 1.76
SSBP4-201ENST00000270061 OTOP3Q7RTS5 596 aa26.04■■□□□ 1.76
SSBP4-201ENST00000270061 PLCD3Q8N3E9 789 aa26.04■■□□□ 1.76
SSBP4-201ENST00000270061 CEP112Q8N8E3 955 aa26.04■■□□□ 1.76
SSBP4-201ENST00000270061 ACSF2Q96CM8 615 aaPredicted RBP26.04■■□□□ 1.76
SSBP4-201ENST00000270061 GRID2IPA4D2P6 1211 aa26.03■■□□□ 1.76
SSBP4-201ENST00000270061 PPEF2O14830 753 aa26.03■■□□□ 1.76
SSBP4-201ENST00000270061 ITGB3P05106 788 aa26.03■■□□□ 1.76
SSBP4-201ENST00000270061 ASPAP45381 313 aa26.03■■□□□ 1.76
SSBP4-201ENST00000270061 ROR1Q01973 937 aa26.03■■□□□ 1.76
SSBP4-201ENST00000270061 CTXN3Q4LDR2 81 aa26.03■■□□□ 1.76
SSBP4-201ENST00000270061 DSTYKQ6XUX3 929 aa26.03■■□□□ 1.76
SSBP4-201ENST00000270061 RBBP8NLQ8NC74 664 aaPredicted RBP26.03■■□□□ 1.76
SSBP4-201ENST00000270061 ZNF461Q8TAF7 563 aa26.03■■□□□ 1.76
SSBP4-201ENST00000270061 BCO2Q9BYV7 579 aa26.03■■□□□ 1.76
SSBP4-201ENST00000270061 SNX12Q9UMY4 172 aa26.03■■□□□ 1.76
SSBP4-201ENST00000270061 TBC1D4O60343 1298 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 KRT19P08727 400 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 HNRNPA1P09651 372 aaKnown RBP eCLIP26.02■■□□□ 1.76
SSBP4-201ENST00000270061 NOP2P46087 812 aaKnown RBP26.02■■□□□ 1.76
SSBP4-201ENST00000270061 HADHBP55084 474 aaKnown RBP26.02■■□□□ 1.76
SSBP4-201ENST00000270061 LILRA4P59901 499 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 ZNF667Q5HYK9 610 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 TPCN2Q8NHX9 752 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 SLC7A14Q8TBB6 771 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 LRFN3Q9BTN0 628 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 DPP3Q9NY33 737 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 CLUHO75153 1309 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 EFCAB8A8MWE9 144 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 PIRO00625 290 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 PAX3P23760 479 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 HOXA9P31269 272 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 ARPP19P56211 112 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 RBP5P82980 135 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 YWHAHQ04917 246 aaPredicted RBP26.02■■□□□ 1.76
SSBP4-201ENST00000270061 CLEC16AQ2KHT3 1053 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 ACAD10Q6JQN1 1059 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 TRIM72Q6ZMU5 477 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 SLFN11Q7Z7L1 901 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 RHOT2Q8IXI1 618 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 ZDHHC14Q8IZN3 488 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 LRRC57Q8N9N7 239 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms