RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 IREB2P48200 963 aaKnown RBP12.57□□□□□ -0.4
ERBB2-201ENST00000269571 DSTYKQ6XUX3 929 aa12.57□□□□□ -0.4
ERBB2-201ENST00000269571 ZCCHC23Q6ZST2 131 aa12.57□□□□□ -0.4
ERBB2-201ENST00000269571 CROCCP3Q8IVE0 287 aa12.57□□□□□ -0.4
ERBB2-201ENST00000269571 PLEKHG4BQ96PX9 1271 aa12.57□□□□□ -0.4
ERBB2-201ENST00000269571 TMEM39BQ9GZU3 492 aa12.57□□□□□ -0.4
ERBB2-201ENST00000269571 DNAJC16Q9Y2G8 782 aa12.57□□□□□ -0.4
ERBB2-201ENST00000269571 USP20Q9Y2K6 914 aa12.57□□□□□ -0.4
ERBB2-201ENST00000269571 E9PBE3 544 aa12.57□□□□□ -0.4
ERBB2-201ENST00000269571 EIF3DO15371 548 aaKnown RBP eCLIP12.57□□□□□ -0.41e-9■□□□□ 8
ERBB2-201ENST00000269571 KLHL41O60662 606 aa12.57□□□□□ -0.4
ERBB2-201ENST00000269571 ALOX15P16050 662 aaPredicted RBP12.57□□□□□ -0.4
ERBB2-201ENST00000269571 OTUD4Q01804 1114 aaKnown RBP12.57□□□□□ -0.4
ERBB2-201ENST00000269571 TMTC4Q5T4D3 741 aa12.57□□□□□ -0.4
ERBB2-201ENST00000269571 CENPTQ96BT3 561 aa12.57□□□□□ -0.4
ERBB2-201ENST00000269571 TMEM8AQ9HCN3 771 aa12.57□□□□□ -0.4
ERBB2-201ENST00000269571 SMAPO00193 183 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 CREB1P16220 341 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 SERPINB1P30740 379 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 NUP107P57740 925 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 RPL10AP62906 217 aaKnown RBP12.56□□□□□ -0.4
ERBB2-201ENST00000269571 DAB2P98082 770 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 ZNF268Q14587 947 aaPredicted RBP12.56□□□□□ -0.4
ERBB2-201ENST00000269571 OASLQ15646 514 aaKnown RBP12.56□□□□□ -0.4
ERBB2-201ENST00000269571 ADRM1Q16186 407 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 C11orf91Q3C1V1 193 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 COBLL1Q53SF7 1204 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 DUPD1Q68J44 220 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 HHIPL2Q6UWX4 724 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 ACTL9Q8TC94 416 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 USP33Q8TEY7 942 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 CCDC134Q9H6E4 229 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 CAMTA1Q9Y6Y1 1673 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 BNIP3LO60238 219 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 GPC3P51654 580 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 NLRP11P59045 1033 aaKnown RBP12.56□□□□□ -0.4
ERBB2-201ENST00000269571 MTA1Q13330 715 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 GSTA3Q16772 222 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 DEFB107AQ8IZN7 70 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 LNX1Q8TBB1 728 aaPredicted RBP12.56□□□□□ -0.4
ERBB2-201ENST00000269571 SPOCK2Q92563 424 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 SLC10A4Q96EP9 437 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 SH3GL1Q99961 368 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 ORC6Q9Y5N6 252 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 TBX3O15119 743 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 ARHGEF9O43307 516 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 CBFA2T3O75081 653 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 ETS1P14921 441 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 HNRNPH3P31942 346 aaKnown RBP12.56□□□□□ -0.4
ERBB2-201ENST00000269571 PLOD1Q02809 727 aaPredicted RBP12.56□□□□□ -0.4
ERBB2-201ENST00000269571 ZNF662Q6ZS27 426 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 TSHZ1Q6ZSZ6 1077 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 EFCAB3Q8N7B9 438 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 RNF139Q8WU17 664 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 DCUN1D5Q9BTE7 237 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 DCLK3Q9C098 648 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 RPAP3Q9H6T3 665 aaPredicted RBP12.56□□□□□ -0.4
ERBB2-201ENST00000269571 MRGBPQ9NV56 204 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 FBXO28Q9NVF7 368 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 VIRMAQ69YN4 1812 aaKnown RBP12.56□□□□□ -0.4
ERBB2-201ENST00000269571 TBC1D12O60347 775 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 CSDE1O75534 798 aaKnown RBP12.56□□□□□ -0.4
ERBB2-201ENST00000269571 MTMR2Q13614 643 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 DUOXA2Q1HG44 320 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 ZNF786Q8N393 782 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 FITM2Q8N6M3 262 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 ZNF280CQ8ND82 737 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 VPS39Q96JC1 886 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 GCNAQ96QF7 691 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 FGFBP2Q9BYJ0 223 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 CPSF3Q9UKF6 684 aaKnown RBP12.56□□□□□ -0.4
ERBB2-201ENST00000269571 SNX5Q9Y5X3 404 aa12.56□□□□□ -0.4
ERBB2-201ENST00000269571 TRIM43BA6NCK2 446 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 APOL1O14791 398 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 PSMG1O95456 288 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 MMP13P45452 471 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 TTC39BQ5VTQ0 682 aaPredicted RBP12.55□□□□□ -0.4
ERBB2-201ENST00000269571 TWF2Q6IBS0 349 aaKnown RBP12.55□□□□□ -0.4
ERBB2-201ENST00000269571 ZNF720Q7Z2F6 126 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 METTL23Q86XA0 190 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 CDC26Q8NHZ8 85 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 NCLNQ969V3 563 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 OTUD5Q96G74 571 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 ZNF212Q9UDV6 495 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 TSR3Q9UJK0 312 aaKnown RBP12.55□□□□□ -0.4
ERBB2-201ENST00000269571 PFDN6O15212 129 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 GZMAP12544 262 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 NME3Q13232 169 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 EFHC1Q5JVL4 640 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 HGSNATQ68CP4 663 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 SAMD7Q7Z3H4 446 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 EMC1Q8N766 993 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 ZNF570Q96NI8 536 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 TARS2Q9BW92 718 aaKnown RBP12.55□□□□□ -0.4
ERBB2-201ENST00000269571 JPH1Q9HDC5 661 aaPredicted RBP12.55□□□□□ -0.4
ERBB2-201ENST00000269571 FBXO6Q9NRD1 293 aaPredicted RBP12.55□□□□□ -0.4
ERBB2-201ENST00000269571 NMRK1Q9NWW6 199 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 SAE1Q9UBE0 346 aaPredicted RBP12.55□□□□□ -0.4
ERBB2-201ENST00000269571 DNPEPQ9ULA0 475 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 ANGPTL3Q9Y5C1 460 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms