RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 GREM2Q9H772 168 aa11.55□□□□□ -0.56
CHFR-201ENST00000266880 ROPN1Q9HAT0 212 aaPredicted RBP11.55□□□□□ -0.56
CHFR-201ENST00000266880 MYRFQ9Y2G1 1151 aa11.55□□□□□ -0.56
CHFR-201ENST00000266880 MYOM2P54296 1465 aa11.55□□□□□ -0.56
CHFR-201ENST00000266880 TNFAIP8O95379 198 aa11.55□□□□□ -0.56
CHFR-201ENST00000266880 NCKAP1LP55160 1127 aa11.55□□□□□ -0.56
CHFR-201ENST00000266880 B3GNT6Q6ZMB0 384 aa11.55□□□□□ -0.56
CHFR-201ENST00000266880 DEFB107AQ8IZN7 70 aa11.55□□□□□ -0.56
CHFR-201ENST00000266880 URGCPQ8TCY9 931 aa11.55□□□□□ -0.56
CHFR-201ENST00000266880 KIF12Q96FN5 646 aa11.55□□□□□ -0.56
CHFR-201ENST00000266880 CD109Q6YHK3 1445 aa11.55□□□□□ -0.56
CHFR-201ENST00000266880 CCZ1BP86790 482 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 CCZ1P86791 482 aaPredicted RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 OTUD3Q5T2D3 398 aaPredicted RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 CITED4Q96RK1 184 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 MAN1C1Q9NR34 630 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 COQ6Q9Y2Z9 468 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 KHDRBS3O75525 346 aaKnown RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 SCGNO76038 276 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 RPS6KA3P51812 740 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 HSF2Q03933 536 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 CBX3Q13185 183 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 RASGRP2Q7LDG7 609 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 COL23A1Q86Y22 540 aaPredicted RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 PABPC5Q96DU9 382 aaKnown RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 TBATAQ96M53 351 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 RPS6KB2Q9UBS0 482 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 CCDC162PA2VCL2 907 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 H2AFYO75367 372 aaKnown RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 ARF3P61204 181 aaPredicted RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 ARF1P84077 181 aaKnown RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 ZRANB3Q5FWF4 1079 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 TBCELQ5QJ74 424 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 ZNF333Q96JL9 665 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 DDX50Q9BQ39 737 aaKnown RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 COMMD9Q9P000 198 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 ZC3H4Q9UPT8 1303 aaKnown RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 PP2D1A8MPX8 630 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 GNB5O14775 395 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 CLOCKO15516 846 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 NDUFB5O43674 189 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 ZNF37AP17032 561 aaPredicted RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 KCNJ1P48048 391 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 KLK7P49862 253 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 GRSF1Q12849 480 aaKnown RBP eCLIP11.54□□□□□ -0.56
CHFR-201ENST00000266880 AGKQ53H12 422 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 MACC1Q6ZN28 852 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 EFL1Q7Z2Z2 1120 aaKnown RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 EXTL3O43909 919 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 CLEC16AQ2KHT3 1053 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 ZNF614Q8N883 585 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 ZNF669Q96BR6 464 aaPredicted RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 KANSL2Q9H9L4 492 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 RPRD1BQ9NQG5 326 aaKnown RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 COMMD8Q9NX08 183 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 BTG4Q9NY30 223 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 MRC2Q9UBG0 1479 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 TNRQ92752 1358 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 ZNF804BA4D1E1 1349 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 IFNAR1P17181 557 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 RGS4P49798 205 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 CCT8P50990 548 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 HK2P52789 917 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 MAPK6Q16659 721 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 PI16Q6UXB8 463 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 MAGED4Q96JG8 741 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 ANKRD27Q96NW4 1050 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 PPP1R10Q96QC0 940 aaKnown RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 SNX8Q9Y5X2 465 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 P4HBP07237 508 aaKnown RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 CLTBP09497 229 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 RALAP11233 206 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 ATP4AP20648 1035 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 ATP6V1C1P21283 382 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 TGM2P21980 687 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 RASSF6Q6ZTQ3 369 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 NECAB2Q7Z6G3 386 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 SH3TC2Q8TF17 1288 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 HPS3Q969F9 1004 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 ZNF341Q9BYN7 854 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 ZSWIM5Q9P217 1185 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 UBA2Q9UBT2 640 aaPredicted RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 PSMD3O43242 534 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 ADD2P35612 726 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 AQP5P55064 265 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 AP3B2Q13367 1082 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 RGS21Q2M5E4 152 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 PMF1Q6P1K2 205 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 DCPSQ96C86 337 aaKnown RBP11.54□□□□□ -0.56
CHFR-201ENST00000266880 SLC9A7Q96T83 725 aa11.54□□□□□ -0.56
CHFR-201ENST00000266880 KCNQ3O43525 872 aa11.53□□□□□ -0.56
CHFR-201ENST00000266880 MYL12AP19105 171 aa11.53□□□□□ -0.56
CHFR-201ENST00000266880 WARSP23381 471 aaKnown RBP11.53□□□□□ -0.56
CHFR-201ENST00000266880 DENND5BQ6ZUT9 1274 aa11.53□□□□□ -0.56
CHFR-201ENST00000266880 CYP4F12Q9HCS2 524 aa11.53□□□□□ -0.56
CHFR-201ENST00000266880 TMEM260Q9NX78 707 aa11.53□□□□□ -0.56
CHFR-201ENST00000266880 TSPAN19P0C672 248 aa11.53□□□□□ -0.56
CHFR-201ENST00000266880 GUCY1A2P33402 732 aa11.53□□□□□ -0.56
CHFR-201ENST00000266880 EIF4A1P60842 406 aaKnown RBP11.53□□□□□ -0.56
CHFR-201ENST00000266880 DGCR6Q14129 220 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 732.3 ms