RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 NDUFA13Q9P0J0 144 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 PPARGC1AQ9UBK2 798 aaKnown RBP9.16□□□□□ -0.94
VAPB-201ENST00000265619 EBF1Q9UH73 591 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 CROCCQ5TZA2 2017 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 KLRG2A4D1S0 409 aaPredicted RBP9.16□□□□□ -0.94
VAPB-201ENST00000265619 ARHGAP42A6NI28 874 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 ITM2AO43736 263 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 CIB2O75838 187 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 ZBED1O96006 694 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 HMGB2P26583 209 aaKnown RBP9.16□□□□□ -0.94
VAPB-201ENST00000265619 STAT1P42224 750 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 ALDH18A1P54886 795 aaKnown RBP9.16□□□□□ -0.94
VAPB-201ENST00000265619 PPP4CP60510 307 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 STAT4Q14765 748 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 SBK1Q52WX2 424 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 DLK2Q6UY11 383 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 UBL4BQ8N7F7 174 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 ELMO3Q96BJ8 720 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 TTC25Q96NG3 672 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 PCDHB18PQ96TA0 734 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 RRN3Q9NYV6 651 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 DNAJC12Q9UKB3 198 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 ASTN2O75129 1339 aaPredicted RBP9.16□□□□□ -0.94
VAPB-201ENST00000265619 MYO3BQ8WXR4 1341 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 DYTNA2CJ06 578 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 BIRC5O15392 142 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 STRNO43815 780 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 CALCAP01258 141 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 PDIA2Q13087 525 aaKnown RBP9.16□□□□□ -0.94
VAPB-201ENST00000265619 FAM209AQ5JX71 171 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 IZUMO3Q5VZ72 239 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 C16orf86Q6ZW13 317 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 PRPF39Q86UA1 669 aaKnown RBP9.16□□□□□ -0.94
VAPB-201ENST00000265619 ANKMY2Q8IV38 441 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 ZC3H3Q8IXZ2 948 aaKnown RBP9.16□□□□□ -0.94
VAPB-201ENST00000265619 PSPC1Q8WXF1 523 aaKnown RBP9.16□□□□□ -0.94
VAPB-201ENST00000265619 DCUN1D1Q96GG9 259 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 BARHL2Q9NY43 387 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 SERPINA10Q9UK55 444 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 PCDHB13Q9Y5F0 798 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 COL24A1Q17RW2 1714 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 FOXN3O00409 490 aaPredicted RBP9.15□□□□□ -0.94
VAPB-201ENST00000265619 LAD1O00515 517 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 XPO1O14980 1071 aaKnown RBP9.15□□□□□ -0.94
VAPB-201ENST00000265619 SPOPO43791 374 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 ATF2P15336 505 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 CD247P20963 164 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 MZF1P28698 734 aaPredicted RBP9.15□□□□□ -0.94
VAPB-201ENST00000265619 ALCAMQ13740 583 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 CBWD6Q4V339 395 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 TMEM119Q4V9L6 283 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 CBWD3Q5JTY5 395 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 CBWD5Q5RIA9 395 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 SNRNP48Q6IEG0 339 aaKnown RBP9.15□□□□□ -0.94
VAPB-201ENST00000265619 LLGL2Q6P1M3 1020 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 REM2Q8IYK8 340 aaPredicted RBP9.15□□□□□ -0.94
VAPB-201ENST00000265619 CENPSQ8N2Z9 138 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 MARVELD2Q8N4S9 558 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 C12orf50Q8NA57 414 aaPredicted RBP9.15□□□□□ -0.94
VAPB-201ENST00000265619 TRIM11Q96F44 468 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 COX4I2Q96KJ9 171 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 RANBP9Q96S59 729 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 MPHOSPH6Q99547 160 aaKnown RBP9.15□□□□□ -0.94
VAPB-201ENST00000265619 EBF4Q9BQW3 602 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 C20orf27Q9GZN8 174 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 CYP4F11Q9HBI6 524 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 GPAMQ9HCL2 828 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 TRPV5Q9NQA5 729 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 CCPG1Q9ULG6 757 aa9.15□□□□□ -0.94
VAPB-201ENST00000265619 SMCO2A6NFE2 343 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 J3QRK9 145 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 NDC80O14777 642 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 XRCC5P13010 732 aaKnown RBP9.15□□□□□ -0.95
VAPB-201ENST00000265619 TNFAIP3P21580 790 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 PHKA2P46019 1235 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 CXCL9Q07325 125 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 DGKZQ13574 1117 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 PTK6Q13882 451 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 CALCRLQ16602 461 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 XKR5Q6UX68 686 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 NEK8Q86SG6 692 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 HPS6Q86YV9 775 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 ZNF398Q8TD17 642 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 FBXL8Q96CD0 374 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 NDEL1Q9GZM8 345 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 FAM198AQ9UFP1 575 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 ZNHIT2Q9UHR6 403 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 ANKRD31Q8N7Z5 1873 aa9.15□□□□□ -0.95
VAPB-201ENST00000265619 USP17L10C9JJH3 530 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 GOLGA8SH3BPF8 625 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 GOLGA8MH3BSY2 632 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 ZC3H11AO75152 810 aaKnown RBP eCLIP9.14□□□□□ -0.95
VAPB-201ENST00000265619 OCM2P0CE71 109 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 OCMP0CE72 109 aaPredicted RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 TCEA1P23193 301 aaKnown RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 SERPINB6P35237 376 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 PEX3P56589 373 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 UBXN2AP68543 259 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 PRKD1Q15139 912 aaPredicted RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 SF3B4Q15427 424 aaKnown RBP eCLIP9.14□□□□□ -0.953e-8■■■□□ 15.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms