RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 ITIH3Q06033 890 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 MFSD7Q6UXD7 560 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 FAM183BPQ6ZVS7 135 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 SLFN11Q7Z7L1 901 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 PIGZQ86VD9 579 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 FAM131BQ86XD5 332 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 LINC01465Q8N7H1 131 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 DBF4BQ8NFT6 615 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 SLC7A14Q8TBB6 771 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 CASKIN2Q8WXE0 1202 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 ERP44Q9BS26 406 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 ZBED2Q9BTP6 218 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 UNC93B1Q9H1C4 597 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 PCDHGC3Q9UN70 934 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 IKBKGQ9Y6K9 419 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 OTOFQ9HC10 1997 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 A0A1W2PQ45 241 aaPredicted RBP9.77□□□□□ -0.85
SSR3-201ENST00000265044 A0A1W2PQY0 241 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 TMEM191CA6NGB0 347 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 KRT14P02533 472 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 ALDH2P05091 517 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 SETSIPP0DME0 302 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 PMF1Q6P1K2 205 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 LCLAT1Q6UWP7 414 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 SLC24A5Q71RS6 500 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 TTC13Q8NBP0 860 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 EXD1Q8NHP7 514 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 PGLYRP2Q96PD5 576 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 BCO2Q9BYV7 579 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 FAM107BQ9H098 131 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 CXCL16Q9H2A7 254 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 LHX5Q9H2C1 402 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 CNTN3Q9P232 1028 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 MAGED2Q9UNF1 606 aaPredicted RBP9.77□□□□□ -0.85
SSR3-201ENST00000265044 TBKBP1A7MCY6 615 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 GOLGA8MH3BSY2 632 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 M0QYT0 321 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 CES2O00748 559 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 DDX3YO15523 660 aaKnown RBP9.77□□□□□ -0.85
SSR3-201ENST00000265044 FAM189A1O60320 539 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 ZBED1O96006 694 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 BDNFP23560 247 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 MIPP30301 263 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 ALDH7A1P49419 539 aaKnown RBP9.77□□□□□ -0.85
SSR3-201ENST00000265044 GYS2P54840 703 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 SOX4Q06945 474 aaPredicted RBP9.77□□□□□ -0.85
SSR3-201ENST00000265044 GPS1Q13098 491 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 BYSLQ13895 437 aaKnown RBP9.77□□□□□ -0.85
SSR3-201ENST00000265044 ARL13BQ3SXY8 428 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 TFDP3Q5H9I0 405 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 HP1BP3Q5SSJ5 553 aaPredicted RBP9.77□□□□□ -0.85
SSR3-201ENST00000265044 LRRC8DQ7L1W4 858 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 ANKRD52Q8NB46 1076 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 SMG8Q8ND04 991 aaKnown RBP9.77□□□□□ -0.85
SSR3-201ENST00000265044 RIN2Q8WYP3 895 aaPredicted RBP9.77□□□□□ -0.85
SSR3-201ENST00000265044 NCAPGQ9BPX3 1015 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 VPS37BQ9H9H4 285 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 TMEM39AQ9NV64 488 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.77□□□□□ -0.85
SSR3-201ENST00000265044 NR2E1Q9Y466 385 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 NT5C1B-RDH14C9J2C7 533 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 ADAMTS4O75173 837 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 ACSL3O95573 720 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 MOCS2O96007 188 aaPredicted RBP9.76□□□□□ -0.85
SSR3-201ENST00000265044 FGFR1P11362 822 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 CKBP12277 381 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 GBP1P32455 592 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 GBP2P32456 591 aaPredicted RBP9.76□□□□□ -0.85
SSR3-201ENST00000265044 SLC6A3Q01959 620 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 DEUP1Q05D60 604 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 UAP1Q16222 522 aaPredicted RBP9.76□□□□□ -0.85
SSR3-201ENST00000265044 NOMO2Q5JPE7 1267 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 SYCP2LQ5T4T6 812 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 BTBD8Q5XKL5 378 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 RWDD4Q6NW29 188 aaKnown RBP9.76□□□□□ -0.85
SSR3-201ENST00000265044 PXYLP1Q8TE99 480 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 SCLYQ96I15 445 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 SELENOSQ9BQE4 189 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.76□□□□□ -0.854e-7■□□□□ 10.7
SSR3-201ENST00000265044 STXBP5LQ9Y2K9 1186 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 FAN1Q9Y2M0 1017 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 ARVCFO00192 962 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 STK10O94804 968 aaKnown RBP9.76□□□□□ -0.85
SSR3-201ENST00000265044 SELPP16109 830 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 GGCXP38435 758 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 ARSEP51690 589 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 EIF3EP60228 445 aaKnown RBP9.76□□□□□ -0.85
SSR3-201ENST00000265044 TUSC3Q13454 348 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 LPIN1Q14693 890 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 BOLA3Q53S33 107 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 FAM171A1Q5VUB5 890 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 BBOF1Q8ND07 529 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 ADAM32Q8TC27 787 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 SPATA18Q8TC71 538 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 FUT8Q9BYC5 575 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 HIPK3Q9H422 1215 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 CHST7Q9NS84 486 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 KANSL3Q9P2N6 904 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 RAB21Q9UL25 225 aa9.76□□□□□ -0.85
SSR3-201ENST00000265044 WDR90Q96KV7 1748 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms