RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 DDX5P17844 614 aaKnown RBP12.63□□□□□ -0.39
SPG11-201ENST00000261866 CTCFP49711 727 aaPredicted RBP12.63□□□□□ -0.39
SPG11-201ENST00000261866 TPGS1Q6ZTW0 290 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 CALR3Q96L12 384 aaKnown RBP12.63□□□□□ -0.39
SPG11-201ENST00000261866 VWA5AO00534 786 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 TKTL1P51854 596 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 PCNX4Q63HM2 1172 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 VN1R5Q7Z5H4 357 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 SLC20A1Q8WUM9 679 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 SPATA16Q9BXB7 569 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 TRPM5Q9NZQ8 1165 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 RIMBP3CA6NJZ7 1639 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 RIMBP3BA6NNM3 1639 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 RIMBP3Q9UFD9 1639 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 PHF20L1A8MW92 1017 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 GYPCP04921 128 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 TROAPQ12815 778 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 STX3Q13277 289 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 PLD1Q13393 1074 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 IARS2Q9NSE4 1012 aaKnown RBP12.63□□□□□ -0.39
SPG11-201ENST00000261866 DSG3P32926 999 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 NAMPTP43490 491 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 GIT2Q14161 759 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 THEGQ9P2T0 379 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 ALDH1A2O94788 518 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 RHOCP08134 193 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 POU4F1Q01851 419 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 ACAD10Q6JQN1 1059 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 RBM23Q86U06 439 aaKnown RBP12.63□□□□□ -0.39
SPG11-201ENST00000261866 WNK4Q96J92 1243 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 FICDQ9BVA6 458 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 OSBPL10Q9BXB5 764 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 RSAD1Q9HA92 442 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.63□□□□□ -0.39
SPG11-201ENST00000261866 ADAM21Q9UKJ8 722 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 DTNAQ9Y4J8 743 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 CCDC130P13994 396 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 SCNN1BP51168 640 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 RHOAP61586 193 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 TSPAN17Q96FV3 270 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 MTG1Q9BT17 334 aaPredicted RBP12.62□□□□□ -0.39
SPG11-201ENST00000261866 MOXD2PA6NHM9 499 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 PSMD3O43242 534 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 AKAP10O43572 662 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 SHMT1P34896 483 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 MAGEA4P43358 317 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 PPP4CP60510 307 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 GJC2Q5T442 439 aaPredicted RBP12.62□□□□□ -0.39
SPG11-201ENST00000261866 PTF1AQ7RTS3 328 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 SLC24A3Q9HC58 644 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 PLA2G4AP47712 749 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 JAMLQ86YT9 394 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 MTBPQ96DY7 904 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 APOA4P06727 396 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 CHI3L2Q15782 390 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 TATDN2Q93075 761 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 RNF112Q9ULX5 631 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 TGM2P21980 687 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 PLEKHM3Q6ZWE6 761 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 SLFN11Q7Z7L1 901 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 USE1Q9NZ43 259 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 TDRKHQ9Y2W6 561 aaKnown RBP12.62□□□□□ -0.39
SPG11-201ENST00000261866 DUSP10Q9Y6W6 482 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 LOC100653049A0A140TA62 436 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 SH3BGRLO75368 114 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 KRT34O76011 436 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 CDH8P55286 799 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 TRIM60Q495X7 471 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 SLC39A12Q504Y0 691 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 TAS1R2Q8TE23 839 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 HES6Q96HZ4 224 aa12.62□□□□□ -0.39
SPG11-201ENST00000261866 EIF2AQ9BY44 585 aaKnown RBP12.62□□□□□ -0.39
SPG11-201ENST00000261866 TNS2Q63HR2 1409 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 CFAP99D6REC4 459 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 TPH1P17752 444 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 ALDH5A1P51649 535 aaPredicted RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 PGS1Q32NB8 556 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 PTAR1Q7Z6K3 402 aaPredicted RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 ARMC2Q8NEN0 867 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 PIF1Q9H611 641 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 ACTR5Q9H9F9 607 aaPredicted RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 RUVBL2Q9Y230 463 aaKnown RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 MYPNQ86TC9 1320 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 GUCA1CO95843 209 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 RGS4P49798 205 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 HNRNPH2P55795 449 aaKnown RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 ACVR2BQ13705 512 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 FSCN1Q16658 493 aaKnown RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 CCDC142Q17RM4 750 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 PATL1Q86TB9 770 aaKnown RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 CYGBQ8WWM9 190 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 ZBTB45Q96K62 511 aaPredicted RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 PAK5Q9P286 719 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 TRMT6Q9UJA5 497 aaKnown RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 CDYLQ9Y232 598 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 RNASEH1O60930 286 aaKnown RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 STARD3Q14849 445 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 AP1ARQ63HQ0 302 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 PLA2G4CQ9UP65 541 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms