RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 PPP1R16BQ96T49 567 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 LRMDAQ9H2I8 198 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 ACAD9Q9H845 621 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 MANSC1Q9H8J5 431 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 ZNF302Q9NR11 478 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 RABGEF1Q9UJ41 708 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 DICER1Q9UPY3 1922 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 CCDC195A0A1B0GUA6 201 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 GYG2O15488 501 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 GRAP2O75791 330 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 SERPINB3P29508 390 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 NPNTQ6UXI9 565 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 CCDC33Q8N5R6 958 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 STK32AQ8WU08 396 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 CPT1BQ92523 772 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 SLC13A1Q9BZW2 595 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 CYP39A1Q9NYL5 469 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 MARCOQ9UEW3 520 aaPredicted RBP15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 NUMBLQ9Y6R0 609 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 PRPF4O43172 522 aaKnown RBP eCLIP15.15■□□□□ 0.029e-7■■■□□ 15.4
SFSWAP-201ENST00000261674 RBP3P10745 1247 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 BGNP21810 368 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 IL1R2P27930 398 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 ARFIP2P53365 341 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 PPIL2Q13356 520 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 OASLQ15646 514 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 DENND1BQ6P3S1 775 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 DSTYKQ6XUX3 929 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 TTC7BQ86TV6 843 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 TEX2Q8IWB9 1127 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 LRRC71Q8N4P6 559 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 TMEM174Q8WUU8 243 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 TSSK1BQ9BXA7 367 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 TRIM55Q9BYV6 548 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 ARL8BQ9NVJ2 186 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 SENP1Q9P0U3 644 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 ZNFX1Q9P2E3 1918 aaKnown RBP15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 CSDE1O75534 798 aaKnown RBP15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 FAM155BO75949 473 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 HAUS5O94927 633 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 STBD1O95210 358 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 INHBAP08476 426 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 PTDSS1P48651 473 aaKnown RBP15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 EIF3EP60228 445 aaKnown RBP15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 MMRN1Q13201 1228 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 RCN2Q14257 317 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 SLFN12LQ6IEE8 588 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 SCYL2Q6P3W7 929 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 DARS2Q6PI48 645 aaKnown RBP15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 C1orf228Q6PIY5 440 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 CLNKQ7Z7G1 428 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 PPM1NQ8N819 430 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 REPS2Q8NFH8 660 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 GPRASP2Q96D09 838 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 FAXDC2Q96IV6 333 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 CGRRF1Q99675 332 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 FOXP3Q9BZS1 431 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 PCDH9Q9HC56 1237 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 POLIQ9UNA4 740 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 F5H423 210 aaPredicted RBP15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 H7C0C1 242 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 TYROBPO43914 113 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 TPBGLP0DKB5 382 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 PYGBP11216 843 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 ELK3P41970 407 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 SKIV2L2P42285 1042 aaKnown RBP15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 ABL2P42684 1182 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 ATP5OP48047 213 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 CCNHP51946 323 aaPredicted RBP15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 GNPTABQ3T906 1256 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 KHDC1Q4VXA5 237 aaKnown RBP15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 LBX2Q6XYB7 198 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 PPIL6Q8IXY8 311 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 MAB21L3Q8N8X9 362 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 SPATA18Q8TC71 538 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 BATF3Q9NR55 127 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 SHOC2Q9UQ13 582 aa15.14■□□□□ 0.01
SFSWAP-201ENST00000261674 H0YCG3 227 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 AOC2O75106 756 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 TMEM63AO94886 807 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 ATP4AP20648 1035 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 PTK7Q13308 1070 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 PIGHQ14442 188 aaPredicted RBP15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 CEP120Q8N960 986 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.13■□□□□ 0.014e-7■■■□□ 17.6
SFSWAP-201ENST00000261674 HEY1Q9Y5J3 304 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 LDHAP00338 332 aaKnown RBP15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 ESRRAP11474 423 aaPredicted RBP15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 FAAP100Q0VG06 881 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 HADHQ16836 314 aaKnown RBP15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 ZNF699Q32M78 642 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 KBTBD12Q3ZCT8 623 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 ABHD15Q6UXT9 468 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 IGDCC3Q8IVU1 814 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 WDTC1Q8N5D0 677 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 PRPF31Q8WWY3 499 aaKnown RBP15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 MS4A4AQ96JQ5 239 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 SLC24A2Q9UI40 661 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 A0A0B4J269 797 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 GJB1P08034 283 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms