RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 RGS7P49802 495 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 GPC3P51654 580 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 SLC1A5Q15758 541 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 SEZ6Q53EL9 994 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 TTC33Q6PID6 262 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-201ENST00000261646 GALNT15Q8N3T1 639 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 SHISA4Q96DD7 197 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 VPS39Q96JC1 886 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 ECSITQ9BQ95 431 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 LRRC4Q9HBW1 653 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 SAE1Q9UBE0 346 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-201ENST00000261646 IVNS1ABPQ9Y6Y0 642 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 ARHGEF37A1IGU5 675 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 SYCE1LA8MT33 242 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 HNRNPRO43390 633 aaKnown RBP16.85■□□□□ 0.29
SREBF1-201ENST00000261646 USP1O94782 785 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 ZFXP17010 805 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-201ENST00000261646 LBRQ14739 615 aaKnown RBP16.85■□□□□ 0.29
SREBF1-201ENST00000261646 ARSHQ5FYA8 562 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 ZDHHC24Q6UX98 284 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.85■□□□□ 0.29
SREBF1-201ENST00000261646 PACSIN3Q9UKS6 424 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 ORC6Q9Y5N6 252 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 SNX13Q9Y5W8 968 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 MROH7Q68CQ1 1323 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 NPTXRO95502 500 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 FAM58BPP0C7Q3 252 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 SHROOM1Q2M3G4 852 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-201ENST00000261646 LPCAT2Q7L5N7 544 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 OR6Y1Q8NGX8 325 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 GJD4Q96KN9 370 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-201ENST00000261646 MXRA8Q9BRK3 442 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 TARS2Q9BW92 718 aaKnown RBP16.85■□□□□ 0.29
SREBF1-201ENST00000261646 ADNPQ9H2P0 1102 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 SNX25Q9H3E2 840 aa16.85■□□□□ 0.29
SREBF1-201ENST00000261646 DGAT1O75907 488 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 KBTBD12Q3ZCT8 623 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 FOXR2Q6PJQ5 311 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 TASP1Q9H6P5 420 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 ZDHHC18Q9NUE0 388 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 NKX1-2Q9UD57 310 aaPredicted RBP16.84■□□□□ 0.29
SREBF1-201ENST00000261646 ZNF229Q9UJW7 825 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 ZC3H4Q9UPT8 1303 aaKnown RBP16.84■□□□□ 0.29
SREBF1-201ENST00000261646 TGFB1I1O43294 461 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 ALADP13716 330 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 GYS1P13807 737 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 DSTYKQ6XUX3 929 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 EMC1Q8N766 993 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 RFWD2Q8NHY2 731 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 ZNF398Q8TD17 642 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 WDR60Q8WVS4 1066 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 FHDC1Q9C0D6 1143 aaPredicted RBP16.84■□□□□ 0.29
SREBF1-201ENST00000261646 C12orf65Q9H3J6 166 aaKnown RBP16.84■□□□□ 0.29
SREBF1-201ENST00000261646 WDR35Q9P2L0 1181 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 CNTNAP4Q9C0A0 1308 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 DCTN2Q13561 401 aaKnown RBP16.84■□□□□ 0.29
SREBF1-201ENST00000261646 FAM47CQ5HY64 1035 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 MYLK4Q86YV6 388 aaPredicted RBP16.84■□□□□ 0.29
SREBF1-201ENST00000261646 CCDC33Q8N5R6 958 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 NR1H4Q96RI1 486 aaPredicted RBP16.84■□□□□ 0.29
SREBF1-201ENST00000261646 TIPINQ9BVW5 301 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 PKD2L2Q9NZM6 624 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 TMEM59LQ9UK28 342 aa16.84■□□□□ 0.29
SREBF1-201ENST00000261646 GSTA4O15217 222 aa16.83■□□□□ 0.29
SREBF1-201ENST00000261646 THRAP10827 490 aa16.83■□□□□ 0.29
SREBF1-201ENST00000261646 KCNA4P22459 653 aa16.83■□□□□ 0.29
SREBF1-201ENST00000261646 PMLP29590 882 aa16.83■□□□□ 0.29
SREBF1-201ENST00000261646 CIITAP33076 1130 aa16.83■□□□□ 0.29
SREBF1-201ENST00000261646 CCDC15Q0P6D6 951 aa16.83■□□□□ 0.29
SREBF1-201ENST00000261646 MTMR2Q13614 643 aa16.83■□□□□ 0.29
SREBF1-201ENST00000261646 PDPK2PQ6A1A2 396 aa16.83■□□□□ 0.29
SREBF1-201ENST00000261646 BNC2Q6ZN30 1099 aaPredicted RBP16.83■□□□□ 0.29
SREBF1-201ENST00000261646 GPR141Q7Z602 305 aa16.83■□□□□ 0.29
SREBF1-201ENST00000261646 SLFN11Q7Z7L1 901 aa16.83■□□□□ 0.29
SREBF1-201ENST00000261646 EGFL6Q8IUX8 553 aa16.83■□□□□ 0.29
SREBF1-201ENST00000261646 SULF1Q8IWU6 871 aa16.83■□□□□ 0.29
SREBF1-201ENST00000261646 USP13Q92995 863 aaPredicted RBP16.83■□□□□ 0.29
SREBF1-201ENST00000261646 FAM210AQ96ND0 272 aa16.83■□□□□ 0.29
SREBF1-201ENST00000261646 PAIP1Q9H074 479 aaKnown RBP16.83■□□□□ 0.29
SREBF1-201ENST00000261646 MMADHCQ9H3L0 296 aaPredicted RBP16.83■□□□□ 0.29
SREBF1-201ENST00000261646 DCXO43602 365 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 ASNSP08243 561 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 HSPA13P48723 471 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 SPP2Q13103 211 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 Q4G0T1 1027 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 B3GNT6Q6ZMB0 384 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 EFCAB3Q8N7B9 438 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 L3MBTL3Q96JM7 780 aaPredicted RBP16.83■□□□□ 0.28
SREBF1-201ENST00000261646 AGBL1Q96MI9 1066 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 AKT3Q9Y243 479 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 C2orf71A6NGG8 1288 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 E2F6O75461 281 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 LYNP07948 512 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 FOXN2P32314 431 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 MYBPC2Q14324 1141 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 ANO7Q6IWH7 933 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 ALYREFQ86V81 257 aaKnown RBP16.83■□□□□ 0.28
SREBF1-201ENST00000261646 CYP4X1Q8N118 509 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 SH3TC2Q8TF17 1288 aa16.83■□□□□ 0.28
SREBF1-201ENST00000261646 ATP6V1E2Q96A05 226 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms