RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 SLC5A3P53794 718 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 CHRNDQ07001 517 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 CNGA3Q16281 694 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 CLEC16AQ2KHT3 1053 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 FAM209AQ5JX71 171 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 PGM2L1Q6PCE3 622 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 LDHAL6AQ6ZMR3 332 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 KRT25Q7Z3Z0 450 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 TTC13Q8NBP0 860 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 SHKBP1Q8TBC3 707 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 TCP10LQ8TDR4 215 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 JDP2Q8WYK2 163 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 C6orf203Q9P0P8 240 aaPredicted RBP13.19□□□□□ -0.3
FOXN3-201ENST00000261302 PSMC3IPQ9P2W1 217 aaPredicted RBP13.19□□□□□ -0.3
FOXN3-201ENST00000261302 CDH7Q9ULB5 785 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 PCDHB2Q9Y5E7 798 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 ARAP2Q8WZ64 1704 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 GLTPD2A6NH11 291 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 C6orf229H3BNL8 230 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 AQP9O43315 295 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 SULT1C4O75897 302 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 UFL1O94874 794 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 ATP5BP06576 529 aaKnown RBP13.19□□□□□ -0.3
FOXN3-201ENST00000261302 DHRS4L1P0CG22 281 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 ENDOUP21128 410 aaKnown RBP13.19□□□□□ -0.3
FOXN3-201ENST00000261302 TNFAIP3P21580 790 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 C21orf59P57076 290 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 TRIP13Q15645 432 aaPredicted RBP13.19□□□□□ -0.3
FOXN3-201ENST00000261302 NANOGP8Q6NSW7 305 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 ISLR2Q6UXK2 745 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 FASTKD5Q7L8L6 764 aaKnown RBP13.19□□□□□ -0.3
FOXN3-201ENST00000261302 KCNK18Q7Z418 384 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 ACTRT2Q8TDY3 377 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 CCDC127Q96BQ5 260 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 ALKBH8Q96BT7 664 aaKnown RBP13.19□□□□□ -0.3
FOXN3-201ENST00000261302 CNBD2Q96M20 576 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 MKNK1Q9BUB5 465 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 PAIP1Q9H074 479 aaKnown RBP13.19□□□□□ -0.3
FOXN3-201ENST00000261302 MAN1C1Q9NR34 630 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 GID8Q9NWU2 228 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.19□□□□□ -0.32e-6■■□□□ 12.8
FOXN3-201ENST00000261302 WDR90Q96KV7 1748 aa13.19□□□□□ -0.3
FOXN3-201ENST00000261302 MYOCOSA0A1B0GUC4 107 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 FAM237BA0A1B0GVD1 139 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 ZNF701M0R085 212 aaPredicted RBP13.18□□□□□ -0.3
FOXN3-201ENST00000261302 TNFRSF10AO00220 468 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 PFDN6O15212 129 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 ZBTB11O95625 1053 aaPredicted RBP13.18□□□□□ -0.3
FOXN3-201ENST00000261302 ESRRBO95718 433 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 INHBBP09529 407 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 TUBA4AP68366 448 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 RABGAP1LQ5R372 815 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 NEK8Q86SG6 692 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 AMIGO2Q86SJ2 522 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 TMEM126BQ8IUX1 230 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 NIM1KQ8IY84 436 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 MTMR9Q96QG7 549 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 SLC2A11Q9BYW1 496 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 CHST7Q9NS84 486 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 NCKIPSDQ9NZQ3 722 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 PPARGC1AQ9UBK2 798 aaKnown RBP13.18□□□□□ -0.3
FOXN3-201ENST00000261302 GNPTGQ9UJJ9 305 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 ARHGAP42A6NI28 874 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 CYTH3O43739 400 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 SPOPO43791 374 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 PDE8BO95263 885 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 DMPKQ09013 629 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 GK3PQ14409 553 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 MESDQ14696 234 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 CCDC142Q17RM4 750 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 HSF5Q4G112 596 aaPredicted RBP13.18□□□□□ -0.3
FOXN3-201ENST00000261302 ZNF280DQ6N043 979 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 PRPF39Q86UA1 669 aaKnown RBP13.18□□□□□ -0.3
FOXN3-201ENST00000261302 KBTBD6Q86V97 674 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 BANPQ8N9N5 519 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 PCYOX1LQ8NBM8 494 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 CNNM1Q9NRU3 951 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 BARHL2Q9NY43 387 aa13.18□□□□□ -0.3
FOXN3-201ENST00000261302 SF3B1O75533 1304 aaKnown RBP eCLIP13.18□□□□□ -0.33e-6■■■■■ 137.9
FOXN3-201ENST00000261302 MCF2LO15068 1137 aa13.17□□□□□ -0.3
FOXN3-201ENST00000261302 CLDN3O15551 220 aa13.17□□□□□ -0.3
FOXN3-201ENST00000261302 POLR2EP19388 210 aaKnown RBP13.17□□□□□ -0.3
FOXN3-201ENST00000261302 CIITAP33076 1130 aa13.17□□□□□ -0.3
FOXN3-201ENST00000261302 SERPINB6P35237 376 aa13.17□□□□□ -0.3
FOXN3-201ENST00000261302 CDK18Q07002 472 aa13.17□□□□□ -0.3
FOXN3-201ENST00000261302 IZUMO3Q5VZ72 239 aa13.17□□□□□ -0.3
FOXN3-201ENST00000261302 VASH1Q7L8A9 365 aaPredicted RBP13.17□□□□□ -0.3
FOXN3-201ENST00000261302 C14orf80Q86SX3 495 aa13.17□□□□□ -0.3
FOXN3-201ENST00000261302 WDR75Q8IWA0 830 aaKnown RBP13.17□□□□□ -0.3
FOXN3-201ENST00000261302 CCDC89Q8N998 374 aa13.17□□□□□ -0.3
FOXN3-201ENST00000261302 CATSPER1Q8NEC5 780 aa13.17□□□□□ -0.3
FOXN3-201ENST00000261302 HELBQ8NG08 1087 aaPredicted RBP13.17□□□□□ -0.3
FOXN3-201ENST00000261302 TSPAN14Q8NG11 270 aa13.17□□□□□ -0.3
FOXN3-201ENST00000261302 PSPC1Q8WXF1 523 aaKnown RBP13.17□□□□□ -0.3
FOXN3-201ENST00000261302 SLC35C1Q96A29 364 aa13.17□□□□□ -0.3
FOXN3-201ENST00000261302 TMIGD2Q96BF3 282 aa13.17□□□□□ -0.3
FOXN3-201ENST00000261302 NUDT12Q9BQG2 462 aa13.17□□□□□ -0.3
FOXN3-201ENST00000261302 DCLK3Q9C098 648 aa13.17□□□□□ -0.3
FOXN3-201ENST00000261302 VPS45Q9NRW7 570 aa13.17□□□□□ -0.3
FOXN3-201ENST00000261302 SLC17A7Q9P2U7 560 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms