RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 ATP8B1O43520 1251 aa23.5■■□□□ 1.35
SIX3-201ENST00000260653 IL1R2P27930 398 aa23.5■■□□□ 1.35
SIX3-201ENST00000260653 TNNT3P45378 269 aaPredicted RBP23.5■■□□□ 1.35
SIX3-201ENST00000260653 ZNF143P52747 638 aaPredicted RBP23.5■■□□□ 1.35
SIX3-201ENST00000260653 FAM189BP81408 668 aa23.5■■□□□ 1.35
SIX3-201ENST00000260653 SLC6A3Q01959 620 aa23.5■■□□□ 1.35
SIX3-201ENST00000260653 SMTNL2Q2TAL5 461 aa23.5■■□□□ 1.35
SIX3-201ENST00000260653 DBF4BQ8NFT6 615 aa23.5■■□□□ 1.35
SIX3-201ENST00000260653 SYT15Q9BQS2 421 aa23.5■■□□□ 1.35
SIX3-201ENST00000260653 FTHL17Q9BXU8 183 aa23.5■■□□□ 1.35
SIX3-201ENST00000260653 ZWILCHQ9H900 591 aa23.5■■□□□ 1.35
SIX3-201ENST00000260653 BHMG1C9JSJ3 638 aaPredicted RBP23.5■■□□□ 1.35
SIX3-201ENST00000260653 MAP2K7O14733 419 aa23.5■■□□□ 1.35
SIX3-201ENST00000260653 GPD1P21695 349 aa23.5■■□□□ 1.35
SIX3-201ENST00000260653 SH3PXD2AQ5TCZ1 1133 aa23.5■■□□□ 1.35
SIX3-201ENST00000260653 CCDC137Q6PK04 289 aaKnown RBP23.5■■□□□ 1.35
SIX3-201ENST00000260653 HDXQ7Z353 690 aa23.5■■□□□ 1.35
SIX3-201ENST00000260653 DDX42Q86XP3 938 aaKnown RBP eCLIP23.5■■□□□ 1.35
SIX3-201ENST00000260653 ZNF280BQ86YH2 543 aa23.5■■□□□ 1.35
SIX3-201ENST00000260653 C1orf54Q8WWF1 131 aa23.5■■□□□ 1.35
SIX3-201ENST00000260653 KHSRPQ92945 711 aaKnown RBP eCLIP23.5■■□□□ 1.35
SIX3-201ENST00000260653 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.5■■□□□ 1.35
SIX3-201ENST00000260653 ODC1P11926 461 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 LCP1P13796 627 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 PDGFRAP16234 1089 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 PLA2G4AP47712 749 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 KLF1Q13351 362 aaPredicted RBP23.49■■□□□ 1.35
SIX3-201ENST00000260653 CASP8Q14790 479 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 RAPGEF5Q92565 580 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 SLITRK1Q96PX8 696 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 WBP1LQ9NX94 342 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 BEST1O76090 585 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 RPL34P49207 117 aaKnown RBP23.49■■□□□ 1.35
SIX3-201ENST00000260653 C15orf59Q2T9L4 293 aaPredicted RBP23.49■■□□□ 1.35
SIX3-201ENST00000260653 RAB6CQ53S08 254 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 KCNT1Q5JUK3 1230 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 MFSD7Q6UXD7 560 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 POLNQ7Z5Q5 900 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 RCOR2Q8IZ40 523 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 C12orf50Q8NA57 414 aaPredicted RBP23.49■■□□□ 1.35
SIX3-201ENST00000260653 ATG4AQ8WYN0 398 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 RBM41Q96IZ5 413 aaKnown RBP23.49■■□□□ 1.35
SIX3-201ENST00000260653 UROC1Q96N76 676 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 MED10Q9BTT4 135 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 DUSP16Q9BY84 665 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 RAB6CQ9H0N0 254 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 PCSK1NQ9UHG2 260 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 PCYOX1Q9UHG3 505 aa23.49■■□□□ 1.35
SIX3-201ENST00000260653 MYBPHLA2RUH7 354 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 PITPNM1O00562 1244 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 DDHD2O94830 711 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 EPHB4P54760 987 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 SNX16P57768 344 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 DHX34Q14147 1143 aaKnown RBP23.48■■□□□ 1.35
SIX3-201ENST00000260653 PLEKHG4Q58EX7 1191 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 PIGZQ86VD9 579 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 JAMLQ86YT9 394 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 CFAP57Q96MR6 1250 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 RTP3Q9BQQ7 232 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 CNPY3Q9BT09 278 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 R3HDM2Q9Y2K5 976 aaKnown RBP23.48■■□□□ 1.35
SIX3-201ENST00000260653 MKI67P46013 3256 aaKnown RBP23.48■■□□□ 1.35
SIX3-201ENST00000260653 SCN5AQ14524 2016 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 LRRD1A4D1F6 860 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 XPO1O14980 1071 aaKnown RBP23.48■■□□□ 1.35
SIX3-201ENST00000260653 RNF8O76064 485 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 KRT10P13645 584 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 NPR3P17342 541 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 MIPP30301 263 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 COILP38432 576 aaPredicted RBP23.48■■□□□ 1.35
SIX3-201ENST00000260653 PTGIRP43119 386 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 KCNJ1P48048 391 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 ADCY2Q08462 1091 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 NOMO2Q5JPE7 1267 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 CHST7Q9NS84 486 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 ASNSD1Q9NWL6 643 aa23.48■■□□□ 1.35
SIX3-201ENST00000260653 UTP11Q9Y3A2 253 aaKnown RBP23.48■■□□□ 1.35
SIX3-201ENST00000260653 CDO1Q16878 200 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 CLEC20AQ6ZU45 233 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 ZDHHC17Q8IUH5 632 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 RSPH1Q8WYR4 309 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 PCED1BQ96HM7 432 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 TRIM31Q9BZY9 425 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 LRRC19Q9H756 370 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 KRT82Q9NSB4 513 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 DDX56Q9NY93 547 aaKnown RBP23.47■■□□□ 1.35
SIX3-201ENST00000260653 FAM53CQ9NYF3 392 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 DAPK3O43293 454 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 ACAP1Q15027 740 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 HADHQ16836 314 aaKnown RBP23.47■■□□□ 1.35
SIX3-201ENST00000260653 TCTN1Q2MV58 587 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 CCDC14Q49A88 953 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 KAZNQ674X7 775 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 SPOCD1Q6ZMY3 1216 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 SND1Q7KZF4 910 aaKnown RBP eCLIP23.47■■□□□ 1.35
SIX3-201ENST00000260653 CCDC105Q8IYK2 499 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 MAIP1Q8WWC4 291 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 ZBTB9Q96C00 473 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 HSFY1Q96LI6 401 aa23.47■■□□□ 1.35
SIX3-201ENST00000260653 DPH5Q9H2P9 285 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms