RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 DUS2Q9NX74 493 aaKnown RBP20.28■□□□□ 0.84
TM6SF1-201ENST00000258909 EGFP01133 1207 aa20.27■□□□□ 0.84
TM6SF1-201ENST00000258909 CMA1P23946 247 aa20.27■□□□□ 0.84
TM6SF1-201ENST00000258909 RAP1GAPP47736 663 aa20.27■□□□□ 0.84
TM6SF1-201ENST00000258909 GALK1P51570 392 aa20.27■□□□□ 0.84
TM6SF1-201ENST00000258909 CDH8P55286 799 aa20.27■□□□□ 0.84
TM6SF1-201ENST00000258909 GRSF1Q12849 480 aaKnown RBP eCLIP20.27■□□□□ 0.84
TM6SF1-201ENST00000258909 PDGFRLQ15198 375 aa20.27■□□□□ 0.84
TM6SF1-201ENST00000258909 SYNPOQ8N3V7 929 aa20.27■□□□□ 0.84
TM6SF1-201ENST00000258909 GOLGA5Q8TBA6 731 aa20.27■□□□□ 0.84
TM6SF1-201ENST00000258909 PARD3BQ8TEW8 1205 aa20.27■□□□□ 0.84
TM6SF1-201ENST00000258909 SECISBP2LQ93073 1101 aaKnown RBP20.27■□□□□ 0.84
TM6SF1-201ENST00000258909 SMYD3Q9H7B4 428 aa20.27■□□□□ 0.84
TM6SF1-201ENST00000258909 POLR3BQ9NW08 1133 aaPredicted RBP20.27■□□□□ 0.84
TM6SF1-201ENST00000258909 RAB23Q9ULC3 237 aa20.27■□□□□ 0.84
TM6SF1-201ENST00000258909 SDK1Q7Z5N4 2213 aa20.27■□□□□ 0.84
TM6SF1-201ENST00000258909 HELZP42694 1942 aaKnown RBP20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 TRDMT1O14717 391 aaKnown RBP20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 TRIM66O15016 1216 aa20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 GJA4P35212 333 aa20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 DLG4P78352 724 aa20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 IFRD2Q12894 506 aaPredicted RBP20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 USP4Q13107 963 aa20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 SIM2Q14190 667 aaPredicted RBP20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 SCARA5Q6ZMJ2 495 aa20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 OSCP1Q8WVF1 389 aa20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 SYAP1Q96A49 352 aaPredicted RBP20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 B3GNT5Q9BYG0 378 aa20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 LINC00597Q9H2U6 94 aa20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 KCTD10Q9H3F6 313 aa20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 ECT2Q9H8V3 914 aa20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 DMAC2Q9NW81 257 aa20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 TRPM5Q9NZQ8 1165 aa20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 GMEB2Q9UKD1 530 aa20.26■□□□□ 0.83
TM6SF1-201ENST00000258909 PAPSS2O95340 614 aaPredicted RBP20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 STAU1O95793 577 aaKnown RBP20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 ABL1P00519 1130 aa20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 ATICP31939 592 aa20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 IFNAR2P48551 515 aa20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 PXNP49023 591 aaPredicted RBP20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 ZXDBP98169 803 aa20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 PSMD2Q13200 908 aa20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 RSPO4Q2I0M5 234 aaPredicted RBP20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 ZNF699Q32M78 642 aa20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 ERMP1Q7Z2K6 904 aa20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 LONP2Q86WA8 852 aa20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 CPA6Q8N4T0 437 aa20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 B3GALNT2Q8NCR0 500 aa20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 C8orf48Q96LL4 319 aa20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 PARD6AQ9NPB6 346 aa20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 USP18Q9UMW8 372 aa20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 HPSEQ9Y251 543 aa20.25■□□□□ 0.83
TM6SF1-201ENST00000258909 RNF40O75150 1001 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 VNN1O95497 513 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 C4BPAP04003 597 aaKnown RBP20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 NR3C1P04150 777 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 FAM163BP0C2L3 166 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 PRR29P0C7W0 189 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 TGM1P22735 817 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 SPEM2Q0P670 501 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 NCOA4Q13772 614 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 EML3Q32P44 896 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 P2RY13Q9BPV8 354 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 TTLL2Q9BWV7 592 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 RNF38Q9H0F5 515 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 SDCBP2Q9H190 292 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 ARHGAP26Q9UNA1 814 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 ZNF840PA6NDX5 716 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 SCAMP3O14828 347 aaKnown RBP20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 RPN1P04843 607 aaKnown RBP20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 NDUFA8P51970 172 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 NOP14P78316 857 aaKnown RBP20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 CLDN10P78369 228 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 KRT85P78386 507 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 FOXK2Q01167 660 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 AMPD2Q01433 879 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 TAF10Q12962 218 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 ZNF667Q5HYK9 610 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 CEP135Q66GS9 1140 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 DGLUCYQ7Z3D6 616 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 ATP2A3Q93084 1043 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 CEP295NLQ96MC4 621 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 KCNK16Q96T55 309 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 ELOVL4Q9GZR5 314 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 SMPD4Q9NXE4 827 aa20.24■□□□□ 0.83
TM6SF1-201ENST00000258909 RALGAPA1Q6GYQ0 2036 aa20.23■□□□□ 0.83
TM6SF1-201ENST00000258909 LEFTY2O00292 366 aa20.23■□□□□ 0.83
TM6SF1-201ENST00000258909 PDXKO00764 312 aa20.23■□□□□ 0.83
TM6SF1-201ENST00000258909 SYKP43405 635 aa20.23■□□□□ 0.83
TM6SF1-201ENST00000258909 ORC1Q13415 861 aa20.23■□□□□ 0.83
TM6SF1-201ENST00000258909 PUM1Q14671 1186 aaKnown RBP eCLIP20.23■□□□□ 0.83
TM6SF1-201ENST00000258909 LAIR1Q6GTX8 287 aa20.23■□□□□ 0.83
TM6SF1-201ENST00000258909 SLC9A9Q8IVB4 645 aa20.23■□□□□ 0.83
TM6SF1-201ENST00000258909 EZH1Q92800 747 aaPredicted RBP20.23■□□□□ 0.83
TM6SF1-201ENST00000258909 MED10Q9BTT4 135 aa20.23■□□□□ 0.83
TM6SF1-201ENST00000258909 VRTNQ9H8Y1 702 aa20.23■□□□□ 0.83
TM6SF1-201ENST00000258909 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.23■□□□□ 0.834e-6■■■■■ 131.4
TM6SF1-201ENST00000258909 USP25Q9UHP3 1055 aa20.23■□□□□ 0.83
TM6SF1-201ENST00000258909 SPTBN2O15020 2390 aa20.22■□□□□ 0.83
TM6SF1-201ENST00000258909 DRD1P21728 446 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms