RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 CTCFP49711 727 aaPredicted RBP9.54□□□□□ -0.88
CKAP2-201ENST00000258607 MOGSQ13724 837 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 NOL9Q5SY16 702 aaKnown RBP9.54□□□□□ -0.88
CKAP2-201ENST00000258607 DUPD1Q68J44 220 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 PPM1NQ8N819 430 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 FAF2Q96CS3 445 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 TIPINQ9BVW5 301 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 LRRC4Q9HBW1 653 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 SLC5A4Q9NY91 659 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 IP6K2Q9UHH9 426 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 G3BP2Q9UN86 482 aaKnown RBP9.54□□□□□ -0.88
CKAP2-201ENST00000258607 COQ4Q9Y3A0 265 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 TMEM120BA0PK00 339 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 TCP11X1B4DZS4 312 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 M0QZ92 97 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 ATP2A1O14983 1001 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 HUS1O60921 280 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 CYP3A5P20815 502 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 CA4P22748 312 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 ICAM3P32942 547 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 CENPCQ03188 943 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 RNASELQ05823 741 aaKnown RBP9.53□□□□□ -0.88
CKAP2-201ENST00000258607 FSCN1Q16658 493 aaKnown RBP9.53□□□□□ -0.88
CKAP2-201ENST00000258607 HADHQ16836 314 aaKnown RBP9.53□□□□□ -0.88
CKAP2-201ENST00000258607 GLE1Q53GS7 698 aaKnown RBP9.53□□□□□ -0.88
CKAP2-201ENST00000258607 ZPBP2Q6X784 338 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 P3H4Q92791 437 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 LTBP3Q9NS15 1303 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 PHIPQ8WWQ0 1821 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 C9IYK1 514 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 ATG7O95352 703 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 EDNRBP24530 442 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 GJA9P57773 515 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 PPP2R2AP63151 447 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 RBP5P82980 135 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 DNAJC3Q13217 504 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 NBPF20Q3BBV1 942 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 ZNF662Q6ZS27 426 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 TTC30AQ86WT1 665 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 C12orf56Q8IXR9 622 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 SLC7A14Q8TBB6 771 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 PYROXD1Q8WU10 500 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 LGMNQ99538 433 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 IKBKGQ9Y6K9 419 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 SCINQ9Y6U3 715 aa9.53□□□□□ -0.88
CKAP2-201ENST00000258607 GREB1LQ9C091 1923 aaPredicted RBP9.53□□□□□ -0.88
CKAP2-201ENST00000258607 A0A0A6YYK5 440 aaPredicted RBP9.52□□□□□ -0.88
CKAP2-201ENST00000258607 C2orf71A6NGG8 1288 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 TJP3O95049 919 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 ZBED1O96006 694 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 USP17L7P0C7H9 530 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 FGFR1P11362 822 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 SP100P23497 879 aaPredicted RBP9.52□□□□□ -0.88
CKAP2-201ENST00000258607 MDH1P40925 334 aaKnown RBP9.52□□□□□ -0.88
CKAP2-201ENST00000258607 PTGIRP43119 386 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 GBE1Q04446 702 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 PRKCZQ05513 592 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 MCL1Q07820 350 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 MARCH8Q5T0T0 291 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 ALS2CLQ60I27 953 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 ZNF449Q6P9G9 518 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 HFE2Q6ZVN8 426 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 NLRP14Q86W24 1093 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 ATL2Q8NHH9 583 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 SNF8Q96H20 258 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 PEBP4Q96S96 227 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 PRM3Q9NNZ6 103 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 SLCO1B3Q9NPD5 702 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 SMYD2Q9NRG4 433 aa9.52□□□□□ -0.88
CKAP2-201ENST00000258607 A0A1W2PPM1 405 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 MCF2LO15068 1137 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 EIF3HO15372 352 aaKnown RBP eCLIP9.52□□□□□ -0.89
CKAP2-201ENST00000258607 RIPK2O43353 540 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 RFX1P22670 979 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 RBL1P28749 1068 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 DUSP28Q4G0W2 176 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 LRRC34Q8IZ02 419 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 TTC17Q96AE7 1141 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 SLITRK1Q96PX8 696 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 PABPC3Q9H361 631 aaKnown RBP9.52□□□□□ -0.89
CKAP2-201ENST00000258607 FZD8Q9H461 694 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 ST6GALNAC4Q9H4F1 302 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 TMBIM4Q9HC24 238 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 ETNK2Q9NVF9 386 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 FAM53CQ9NYF3 392 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 ATAD5Q96QE3 1844 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 ADGRA2Q96PE1 1338 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 SMIM28A0A1B0GU29 152 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 TMEM191CA6NGB0 347 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 A6NJR5 290 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 CYB561D2O14569 222 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 NEBLO76041 1014 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 CALB1P05937 261 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 P4HA1P13674 534 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 TPH1P17752 444 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 MAGEA4P43358 317 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 CLCNKBP51801 687 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 YWHAEP62258 255 aaKnown RBP9.52□□□□□ -0.89
CKAP2-201ENST00000258607 SNX17Q15036 470 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 C3orf62Q6ZUJ4 267 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms